STRINGSTRING
CBG06885 CBG06885 CBG03789 CBG03789 kat-1 kat-1 pks-1 pks-1 fasn-1 fasn-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CBG06885Protein CBG06885; Belongs to the thiolase-like superfamily. Thiolase family. (457 aa)
CBG03789Protein CBG03789; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (400 aa)
kat-1Protein CBR-KAT-1; Belongs to the thiolase-like superfamily. Thiolase family. (407 aa)
pks-1Protein CBG14683. (7813 aa)
fasn-1Protein CBR-FASN-1. (2731 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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