STRINGSTRING
snf-10 snf-10 snf-11 snf-11 CBG18418 CBG18418 CBG18416 CBG18416 CBG18082 CBG18082 snf-2 snf-2 snf-6 snf-6 snf-1 snf-1 dat-1 dat-1 snf-3 snf-3 Cbr-snf-8 Cbr-snf-8 mod-5 mod-5 snf-5 snf-5 snf-9 snf-9 snf-12 snf-12
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
snf-10Protein CBR-SNF-10. (673 aa)
snf-11Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (609 aa)
CBG18418Protein CBG18418. (273 aa)
CBG18416Protein CBG18416. (476 aa)
CBG18082Protein CBG18082. (712 aa)
snf-2Protein CBR-SNF-2. (649 aa)
snf-6Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (709 aa)
snf-1Protein CBR-SNF-1. (616 aa)
dat-1Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (622 aa)
snf-3Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (599 aa)
Cbr-snf-8Protein CBR-SNF-8. (565 aa)
mod-5Protein CBR-MOD-5. (671 aa)
snf-5Protein CBR-SNF-5. (698 aa)
snf-9Protein CBR-SNF-9. (709 aa)
snf-12Protein CBR-SNF-12. (1003 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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