STRINGSTRING
daao-1 daao-1 ddo-2 ddo-2 CBG05075 CBG05075 CBG05192 CBG05192 ddo-1 ddo-1 CBG06141 CBG06141 CBG06643 CBG06643 CBG10733 CBG10733 ddo-3 ddo-3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
daao-1D-amino-acid oxidase; Catalyzes oxidative deamination of D-amino acids, in particular D-alanine, and could be responsible for the degradation of diet-derived D-alanine in the intestine. Acts on a variety of D-amino acids with greater preference towards those with basic and aromatic groups followed by those bearing neutral groups. Has no activity against acidic D-amino acids, L-amino acids or N-methyl-L-aspartic acid. May play a role in egg-laying events and early development. (329 aa)
ddo-2D-aspartate oxidase 2; Selectively catalyzes the oxidative deamination of D- aspartate and its N-methylated derivative, N-methyl D-aspartate. Highest catalytic efficiency for D-Glu followed by D-Asp and NMDA. May play a role in the egg-laying events and early development of the worm, in addition to quality control of the germ cells. Belongs to the DAMOX/DASOX family. (331 aa)
CBG05075Protein CBG05075. (387 aa)
CBG05192Protein CBG05192. (492 aa)
ddo-1Protein CBR-DDO-1. (337 aa)
CBG06141Protein CBG06141. (528 aa)
CBG06643L-2-hydroxyglutarate dehydrogenase, mitochondrial. (434 aa)
CBG10733Protein CBG10733. (544 aa)
ddo-3Protein CBR-DDO-3. (383 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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