Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| fem-1 | fog-3 | A8XWR4 | Q95WA6 | Protein CBR-FEM-1. | Protein CBR-FOG-3. | 0.538 |
| fem-1 | tra-1 | A8XWR4 | Q17308 | Protein CBR-FEM-1. | Sex-determining transformer protein 1; Plays a major role in controlling sexual phenotype. Terminal global regulator in a well-characterized cascade of sex-determining genes (By similarity). Promotes female development (By similarity). Interacts with tra-2 to promote spermatogenesis. Promotes spermatogenesis through the Tip60 HAT complex and by regulating the expression of genes, such as fog-3, required for male development. Association with chromatin and at the fog-3 promoter requires wdr-5.1, and may also require wdr-5.2 (By similarity). With trr-1, activates the fog-3 gene to determ [...] | 0.665 |
| fem-1 | tra-2 | A8XWR4 | Q17307 | Protein CBR-FEM-1. | Sex-determining transformer protein 2; Plays a major role in controlling sexual cell fates. Promotes female development in XX animals where it sequesters one or more of the FEM proteins to the membrane thereby freeing the tra-1 protein (a putative transcription factor) to enter the nucleus and promote female development (By similarity). In XO animals it acts as a receptor for her-1 which prevents it from binding to FEM proteins thereby repressing the activity of tra-1 (By similarity). Negatively regulates male development when bound to fem-3 and is required together with tra-1 for prom [...] | 0.637 |
| fog-1 | fog-3 | Q6E3E1 | Q95WA6 | Protein CBR-FOG-1. | Protein CBR-FOG-3. | 0.885 |
| fog-1 | gld-1 | Q6E3E1 | A8WMN3 | Protein CBR-FOG-1. | Protein CBR-GLD-1. | 0.765 |
| fog-1 | tra-1 | Q6E3E1 | Q17308 | Protein CBR-FOG-1. | Sex-determining transformer protein 1; Plays a major role in controlling sexual phenotype. Terminal global regulator in a well-characterized cascade of sex-determining genes (By similarity). Promotes female development (By similarity). Interacts with tra-2 to promote spermatogenesis. Promotes spermatogenesis through the Tip60 HAT complex and by regulating the expression of genes, such as fog-3, required for male development. Association with chromatin and at the fog-3 promoter requires wdr-5.1, and may also require wdr-5.2 (By similarity). With trr-1, activates the fog-3 gene to determ [...] | 0.586 |
| fog-1 | tra-2 | Q6E3E1 | Q17307 | Protein CBR-FOG-1. | Sex-determining transformer protein 2; Plays a major role in controlling sexual cell fates. Promotes female development in XX animals where it sequesters one or more of the FEM proteins to the membrane thereby freeing the tra-1 protein (a putative transcription factor) to enter the nucleus and promote female development (By similarity). In XO animals it acts as a receptor for her-1 which prevents it from binding to FEM proteins thereby repressing the activity of tra-1 (By similarity). Negatively regulates male development when bound to fem-3 and is required together with tra-1 for prom [...] | 0.671 |
| fog-3 | fem-1 | Q95WA6 | A8XWR4 | Protein CBR-FOG-3. | Protein CBR-FEM-1. | 0.538 |
| fog-3 | fog-1 | Q95WA6 | Q6E3E1 | Protein CBR-FOG-3. | Protein CBR-FOG-1. | 0.885 |
| fog-3 | gld-1 | Q95WA6 | A8WMN3 | Protein CBR-FOG-3. | Protein CBR-GLD-1. | 0.811 |
| fog-3 | nurf-1 | Q95WA6 | A8XCE3 | Protein CBR-FOG-3. | Protein CBR-NURF-1. | 0.402 |
| fog-3 | she-1 | Q95WA6 | A8XDR5 | Protein CBR-FOG-3. | F-box protein she-1; Sex-determining factor which regulates hermaphrodite development. | 0.479 |
| fog-3 | tra-1 | Q95WA6 | Q17308 | Protein CBR-FOG-3. | Sex-determining transformer protein 1; Plays a major role in controlling sexual phenotype. Terminal global regulator in a well-characterized cascade of sex-determining genes (By similarity). Promotes female development (By similarity). Interacts with tra-2 to promote spermatogenesis. Promotes spermatogenesis through the Tip60 HAT complex and by regulating the expression of genes, such as fog-3, required for male development. Association with chromatin and at the fog-3 promoter requires wdr-5.1, and may also require wdr-5.2 (By similarity). With trr-1, activates the fog-3 gene to determ [...] | 0.703 |
| fog-3 | tra-2 | Q95WA6 | Q17307 | Protein CBR-FOG-3. | Sex-determining transformer protein 2; Plays a major role in controlling sexual cell fates. Promotes female development in XX animals where it sequesters one or more of the FEM proteins to the membrane thereby freeing the tra-1 protein (a putative transcription factor) to enter the nucleus and promote female development (By similarity). In XO animals it acts as a receptor for her-1 which prevents it from binding to FEM proteins thereby repressing the activity of tra-1 (By similarity). Negatively regulates male development when bound to fem-3 and is required together with tra-1 for prom [...] | 0.789 |
| fog-3 | tra-4 | Q95WA6 | A8XN82 | Protein CBR-FOG-3. | Protein CBR-TRA-4. | 0.477 |
| fog-3 | trr-1 | Q95WA6 | A8WTE8 | Protein CBR-FOG-3. | Transcription-associated protein 1; Influences germ cell fate in hermaphrodites. Acts downstream of tra-2 and tra-3 and through the Tip60 histone acetyltransferase complex to regulate germ cell fate decisions. Required for spermatogenesis and embryonic development. Acts with tra-2 to promote expression of fog-3 and control male tail development. Involved in the negative regulation of vulval development (By similarity). | 0.479 |
| gld-1 | fog-1 | A8WMN3 | Q6E3E1 | Protein CBR-GLD-1. | Protein CBR-FOG-1. | 0.765 |
| gld-1 | fog-3 | A8WMN3 | Q95WA6 | Protein CBR-GLD-1. | Protein CBR-FOG-3. | 0.811 |
| gld-1 | lin-53 | A8WMN3 | Q61Y48 | Protein CBR-GLD-1. | Probable histone-binding protein lin-53; Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Required for hcp-3 and his-1 stabilization, localization of hcp-3 to centromeres and for proper chromosome segregation. Synthetic multivulva class B (synMuvB) protein. SynMuvB proteins are required to repress the induction of vulval development by Ras signaling and probably act by forming the multiprotein DRM complex that represses transcription. | 0.629 |
| gld-1 | she-1 | A8WMN3 | A8XDR5 | Protein CBR-GLD-1. | F-box protein she-1; Sex-determining factor which regulates hermaphrodite development. | 0.630 |
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