STRINGSTRING
cpn-2 cpn-2 cpt-2 cpt-2 lrch-1 lrch-1 fln-1 fln-1 cpn-3 cpn-3 chdp-1 chdp-1 plst-1 plst-1 Cbr-dys-1 Cbr-dys-1 Cbr-vab-10 Cbr-vab-10 vav-1 vav-1 fln-2 fln-2 CBG17945 CBG17945 pes-7 pes-7 unc-70 unc-70 ehbp-1 ehbp-1 CBG21188 CBG21188 pat-6 pat-6 atn-1 atn-1 sma-1 sma-1 cpn-1 cpn-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cpn-2Transgelin; Belongs to the calponin family. (203 aa)
cpt-2Protein CBR-CPT-2. (646 aa)
lrch-1Protein CBG05005. (662 aa)
fln-1Protein CBG10542. (1091 aa)
cpn-3Protein CBR-CPN-3. (142 aa)
chdp-1Protein CBG12581. (335 aa)
plst-1Protein CBR-PLST-1. (623 aa)
Cbr-dys-1Protein CBR-DYS-1. (2353 aa)
Cbr-vab-10Protein CBR-VAB-10. (1308 aa)
vav-1Protein CBR-VAV-1. (971 aa)
fln-2Protein CBR-FLN-2.2. (1279 aa)
CBG17945Protein CBG17945. (486 aa)
pes-7Protein CBR-PES-7. (1406 aa)
unc-70Spectrin beta chain; Belongs to the spectrin family. (2370 aa)
ehbp-1Protein CBR-EHBP-1. (946 aa)
CBG21188Protein CBG21188. (440 aa)
pat-6Protein CBR-PAT-6. (379 aa)
atn-1Protein CBR-ATN-1. (894 aa)
sma-1Protein CBR-SMA-1. (4156 aa)
cpn-1Protein CBR-CPN-1. (192 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
Server load: low (12%) [HD]