STRINGSTRING
clh-3 clh-3 clh-4 clh-4 clh-6 clh-6 aakg-2 aakg-2 aakg-5 aakg-5 aakg-3 aakg-3 aakg-4 aakg-4 clh-5 clh-5 Cbr-clh-2 Cbr-clh-2 CBG05718 CBG05718 aakg-1 aakg-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
clh-3Protein CBR-CLH-3; Belongs to the chloride channel (TC 2.A.49) family. (1103 aa)
clh-4Chloride channel protein. (1117 aa)
clh-6Protein CBR-CLH-6; Belongs to the chloride channel (TC 2.A.49) family. (811 aa)
aakg-2Protein CBR-AAKG-2. (425 aa)
aakg-5Protein CBR-AAKG-5. (476 aa)
aakg-3Protein CBR-AAKG-3. (398 aa)
aakg-4Protein CBR-AAKG-4. (461 aa)
clh-5Chloride channel protein. (801 aa)
Cbr-clh-2Chloride channel protein. (920 aa)
CBG05718Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. (534 aa)
aakg-1Protein CBG11682. (519 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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