(112 nodes) Epidermal growth factor-like domain. network (Caenorhabditis briggsae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CBG04265	Protein CBG04265. (1638 aa)
	CBG04328	Protein CBG04328. (752 aa)
	CBG04432	Protein CBG04432. (1630 aa)
	CBG05036	Protein CBG05036. (1022 aa)
	clec-78	Protein CBR-CLEC-78. (2226 aa)
	CBG05362	Protein CBG05362. (1336 aa)
	nlr-1	Protein CBR-NLR-1. (1206 aa)
	CBG06165	Protein CBG06165. (331 aa)
	CBG06122	Protein CBG06122. (300 aa)
	lin-3	Protein CBR-LIN-3. (450 aa)
	CBG05925	Protein CBG05925. (433 aa)
	CBG05898	Protein CBG05898. (374 aa)
	CBG05891	Protein CBG05891. (1161 aa)
	CBG19173	Protein CBG19173. (141 aa)
	CBG19364	Protein CBG19364. (232 aa)
	mec-9	Protein CBR-MEC-9. (920 aa)
	CBG19478	Protein CBG19478. (729 aa)
	CBG19981	Protein CBG19981. (244 aa)
	CBG19982	Protein CBG19982. (110 aa)
	CBG19989	Protein CBG19989. (223 aa)
	lam-1	Protein CBR-LAM-1. (1183 aa)
	dsl-1	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (257 aa)
	glp-1	Protein CBR-GLP-1. (1326 aa)
	fbl-1	Protein CBR-FBL-1. (925 aa)
	CBG20569	Protein CBG20569. (299 aa)
	egas-2	Protein CBR-TAG-336. (527 aa)
	CBG21295	Protein CBG21295. (1677 aa)
	apx-1	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (484 aa)
	lag-2	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (392 aa)
	CBG22132	Protein CBG22132. (301 aa)
	CBG27706	Protein CBG27706. (738 aa)
	CBG18730	Protein CBG18730. (1378 aa)
	lin-12.2	Protein CBR-LIN-12. (1392 aa)
	CBG06829	Protein CBG06829. (987 aa)
	lin-12.1	Protein CBG06951. (1359 aa)
	eat-20	Abnormal pharyngeal pumping eat-20; Regulates pharyngeal pumping during feeding. (811 aa)
	atrn-1	Protein CBR-TAG-53. (1337 aa)
	slt-1	Protein CBR-SLT-1. (1376 aa)
	hmr-1	Protein CBR-HMR-1; Cadherins are calcium-dependent cell adhesion proteins. (3093 aa)
	Cbr-mab-7	Protein CBR-MAB-7. (489 aa)
	CBG08168	Protein CBG08168. (1251 aa)
	fmil-1	Protein CBG08317. (994 aa)
	cubn-1	Protein CBG08530. (4039 aa)
	mup-4	Protein CBR-MUP-4. (2101 aa)
	nas-31	Zinc metalloproteinase. (610 aa)
	nrx-1	Protein CBR-NRX-1. (1612 aa)
	nid-1	Protein CBR-NID-1. (1590 aa)
	dsl-7	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (325 aa)
	Cbr-fmi-1	Protein CBR-FMI-1. (2592 aa)
	mua-3	Protein CBR-MUA-3. (3770 aa)
	CBG10009	Protein CBG10009. (418 aa)
	CBG10218	Protein CBG10218. (483 aa)
	CBG10645	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (460 aa)
	CBG10696	Protein CBG10696. (914 aa)
	CBG11119	Protein CBG11119. (538 aa)
	agr-1	Protein CBR-AGR-1. (1553 aa)
	CBG11506	Protein CBG11506. (3278 aa)
	CBG11501	Protein CBG11501. (931 aa)
	CBG11486	Protein CBG11486. (69 aa)
	str-90	Protein CBR-STR-90. (654 aa)
	lrp-1	Protein CBR-LRP-1. (4829 aa)
	CBG12050	Protein CBG12050. (4940 aa)
	CBG12386	Protein CBG12386. (2855 aa)
	CBG12999	Protein CBG12999. (256 aa)
	dsl-3	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (259 aa)
	CBG13949	Protein CBG13949. (167 aa)
	irg-7	Protein CBG14163. (2222 aa)
	CBG14255	Protein CBG14255. (1782 aa)
	CBG14317	Protein CBG14317. (853 aa)
	CBG14575	Protein CBG14575. (426 aa)
	CBG14645	Protein CBG14645. (1373 aa)
	CBG14646	Protein CBG14646. (2031 aa)
	CBG14782	Protein CBG14782. (131 aa)
	lgx-1	Protein CBR-LGX-1. (1898 aa)
	CBG15282	Protein CBG15282. (1637 aa)
	CBG15281	Protein CBG15281. (1610 aa)
	spe-9	Protein CBR-SPE-9. (658 aa)
	unc-71	Protein CBR-UNC-71. (1045 aa)
	ced-1	Cell death abnormality protein 1; Involved in programmed cell death/apoptosis. Acts by recruiting ced-6 to phagosomes which enables actin-dependent cytoskeletal reorganization and subsequent engulfment of the apoptotic cell corpse. Has a role in the association of ppk-3 and rab-7 with the phagosomal surface which is necessary for the incorporation of lysosomes to phagosomes during phagosome maturation. Activates the expression of unfolded protein response genes, which are involved in the immune response to live bacteria (By similarity). (1134 aa)
	CBG16014	Protein CBG16014. (2753 aa)
	crb-1	Protein CBR-CRB-1. (1750 aa)
	CBG16269	Protein CBG16269. (213 aa)
	CBG16264	Protein CBG16264. (1437 aa)
	ten-1	Protein CBR-TEN-1. (2909 aa)
	dig-1.1	Protein CBR-DIG-1. (13580 aa)
	CBG16715	Protein CBG16715. (2523 aa)
	CBG17315	Protein CBG17315. (2125 aa)
	igeg-2	Protein CBG17334. (260 aa)
	CBG17987	Protein CBG17987. (265 aa)
	CBG17988	Protein CBG17988. (1188 aa)
	cdh-4	Protein CBR-CDH-4. (4389 aa)
	CBG18408	Protein CBG18408. (868 aa)
	CBG19009	Protein CBG19009. (460 aa)
	CBG19078	Protein CBG19078. (606 aa)
	rme-2	Protein CBR-RME-2. (929 aa)
	itx-1	Protein CBR-ITX-1. (1634 aa)
	CBG03682	Protein CBG03682. (828 aa)
	pat-3	Integrin beta; Belongs to the integrin beta chain family. (818 aa)
	CBG02205	Protein CBG02205. (1110 aa)
	CBG01945	Protein CBG01945. (430 aa)
	CBG01654	Protein CBG01654. (184 aa)
	crld-1	Protein CBG01816. (358 aa)
	igeg-1	Protein CBG01840. (270 aa)
	chhy-1	Hyaluronidase. (470 aa)
	CBG00449	Protein CBG00449. (1562 aa)
	CBG00374	Protein CBG00374. (481 aa)
	CBG00263	Protein CBG00263. (150 aa)
	CBG00262	Protein CBG00262. (135 aa)
	fbn-1	Protein CBR-FBN-1. (3928 aa)
	CBG25015	Protein CBG25015. (222 aa)
	CBG24219	Protein CBG24219. (102 aa)
	CBG23829	Protein CBG23829. (104 aa)

Your Current Organism:

Caenorhabditis briggsae

NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBG00449	CBG14645	A8WN43	A8XKC9	Protein CBG00449.	Protein CBG14645.	0.445
CBG00449	CBG14646	A8WN43	A8XKD0	Protein CBG00449.	Protein CBG14646.	0.445
CBG00449	CBG17315	A8WN43	A8XQT9	Protein CBG00449.	Protein CBG17315.	0.463
CBG00449	CBG27706	A8WN43	B6IJF1	Protein CBG00449.	Protein CBG27706.	0.430
CBG04328	CBG12050	A8WX97	A8XEF6	Protein CBG04328.	Protein CBG12050.	0.436
CBG04328	CBG19478	A8WX97	A8XVN1	Protein CBG04328.	Protein CBG19478.	0.436
CBG04328	lrp-1	A8WX97	A8XE81	Protein CBG04328.	Protein CBR-LRP-1.	0.436
CBG04328	nid-1	A8WX97	A8X8Y5	Protein CBG04328.	Protein CBR-NID-1.	0.577
CBG04328	rme-2	A8WX97	A8WWR1	Protein CBG04328.	Protein CBR-RME-2.	0.436
CBG05362	CBG06829	A8WZP3	A8X360	Protein CBG05362.	Protein CBG06829.	0.938
CBG05362	CBG11501	A8WZP3	A8XCU9	Protein CBG05362.	Protein CBG11501.	0.589
CBG05362	clec-78	A8WZP3	A8WZP0	Protein CBG05362.	Protein CBR-CLEC-78.	0.413
CBG05362	lin-12.2	A8WZP3	A8X358	Protein CBG05362.	Protein CBR-LIN-12.	0.921
CBG05362	pat-3	A8WZP3	A8WVF5	Protein CBG05362.	Integrin beta; Belongs to the integrin beta chain family.	0.474
CBG06829	CBG05362	A8X360	A8WZP3	Protein CBG06829.	Protein CBG05362.	0.938
CBG06829	lag-2	A8X360	A8Y103	Protein CBG06829.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.577
CBG06829	lin-12.2	A8X360	A8X358	Protein CBG06829.	Protein CBR-LIN-12.	0.901
CBG06829	lin-3	A8X360	A8X156	Protein CBG06829.	Protein CBR-LIN-3.	0.633
CBG10645	dsl-3	A8XBI4	A8XI77	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.416
CBG11119	irg-7	A8XCG1	A8XJF4	Protein CBG11119.	Protein CBG14163.	0.505