STRINGSTRING
nfm-1 nfm-1 frm-10 frm-10 frm-2 frm-2 frm-3 frm-3 erm-1 erm-1 max-1.1 max-1.1 frm-4 frm-4 kin-32 kin-32 ptp-1 ptp-1 frm-8 frm-8 Cbr-frm-9 Cbr-frm-9 hum-4 hum-4 max-1.2 max-1.2 CBG01639 CBG01639 hum-6 hum-6 CBG27527 CBG27527 frm-7 frm-7 CBG22314 CBG22314 tln-1 tln-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nfm-1Protein CBR-NFM-1. (690 aa)
frm-10Protein CBR-FRM-10. (533 aa)
frm-2Protein CBR-FRM-2. (590 aa)
frm-3Protein CBR-FRM-3. (1109 aa)
erm-1Protein CBR-ERM-1. (563 aa)
max-1.1Protein CBG09439. (1217 aa)
frm-4Protein CBR-FRM-4. (706 aa)
kin-32Protein CBR-KIN-32; Belongs to the protein kinase superfamily. Tyr protein kinase family. (865 aa)
ptp-1Tyrosine-protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class subfamily. (1024 aa)
frm-8Protein CBR-FRM-8. (788 aa)
Cbr-frm-9Protein CBR-FRM-9. (455 aa)
hum-4Protein CBR-HUM-4; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2720 aa)
max-1.2Protein CBR-MAX-1. (1104 aa)
CBG01639Protein CBG01639. (1579 aa)
hum-6Unconventional myosin heavy chain 6; Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Their highly divergent tails are presumed to bind to membranous compartments, which would be moved relative to actin filaments (By similarity). Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2099 aa)
CBG27527Protein CBG27527. (428 aa)
frm-7Protein CBR-FRM-7. (967 aa)
CBG22314Protein CBG22314. (650 aa)
tln-1Protein CBG22153. (1036 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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