STRINGSTRING
set-23 set-23 CBG18192 CBG18192 met-2 met-2 set-16 set-16 CBG16771 CBG16771 set-12.1 set-12.1 CBG16769 CBG16769 Cbr-met-1 Cbr-met-1 mes-4 mes-4 set-25 set-25
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
set-23Probable histone-lysine N-methyltransferase set-23; Probable histone methyltransferase required for embryonic development; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. (241 aa)
CBG18192Protein CBG18192. (1998 aa)
met-2Protein CBR-MET-2. (1269 aa)
set-16Protein CBR-SET-16. (2526 aa)
CBG16771Protein CBG16771. (326 aa)
set-12.1Protein CBG16770. (400 aa)
CBG16769Protein CBG16769. (213 aa)
Cbr-met-1Protein CBR-MET-1. (2074 aa)
mes-4Protein CBR-MES-4. (836 aa)
set-25Protein CBG03572. (705 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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