STRINGSTRING
CBG01639 CBG01639 frm-2 frm-2 frm-7 frm-7 CBG22314 CBG22314 nfm-1 nfm-1 frm-1 frm-1 frm-3 frm-3 erm-1 erm-1 frm-4 frm-4 ptp-1 ptp-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CBG01639Protein CBG01639. (1579 aa)
frm-2Protein CBR-FRM-2. (590 aa)
frm-7Protein CBR-FRM-7. (967 aa)
CBG22314Protein CBG22314. (650 aa)
nfm-1Protein CBR-NFM-1. (690 aa)
frm-1Protein CBR-FRM-1. (6473 aa)
frm-3Protein CBR-FRM-3. (1109 aa)
erm-1Protein CBR-ERM-1. (563 aa)
frm-4Protein CBR-FRM-4. (706 aa)
ptp-1Tyrosine-protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class subfamily. (1024 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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