STRINGSTRING
pho-11 pho-11 pho-13 pho-13 pho-1 pho-1 pho-14 pho-14 CBG08376 CBG08376 CBG12721 CBG12721 CBG13912 CBG13912 CBG23391 CBG23391 flad-1 flad-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pho-11Protein CBG01002; Belongs to the histidine acid phosphatase family. (433 aa)
pho-13Protein CBG03178; Belongs to the histidine acid phosphatase family. (449 aa)
pho-1Protein CBR-PHO-1; Belongs to the histidine acid phosphatase family. (447 aa)
pho-14Protein CBG07203; Belongs to the histidine acid phosphatase family. (448 aa)
CBG08376Protein CBG08376. (135 aa)
CBG12721Tartrate-resistant acid phosphatase type 5. (384 aa)
CBG13912Protein CBG13912. (271 aa)
CBG23391Protein CBG23391. (690 aa)
flad-1Molybdenum cofactor biosynthesis protein-like region; Catalyzes the adenylation of flavin mononucleotide (FMN) to form flavin adenine dinucleotide (FAD) coenzyme; In the C-terminal section; belongs to the PAPS reductase family. FAD1 subfamily. (523 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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