STRINGSTRING
lam-3 lam-3 pat-3 pat-3 epi-1 epi-1 ina-1 ina-1 emb-9 emb-9 let-2 let-2 dgn-1 dgn-1 CBG20114 CBG20114
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lam-3Protein CBR-LAM-3. (3141 aa)
pat-3Integrin beta; Belongs to the integrin beta chain family. (818 aa)
epi-1Protein CBR-EPI-1. (3820 aa)
ina-1Protein CBR-INA-1; Belongs to the integrin alpha chain family. (1147 aa)
emb-9Protein CBR-EMB-9. (1759 aa)
let-2Protein CBR-LET-2. (1739 aa)
dgn-1Protein CBR-DGN-1. (594 aa)
CBG20114Protein CBG20114. (554 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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