STRINGSTRING
his-47 his-47 his-35 his-35 nap-1 nap-1 his-33 his-33 his-34 his-34 his-7 his-7 his-65 his-65 his-19 his-19 his-21 his-21 his-68 his-68 his-16 his-16 his-15 his-15
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
his-47Histone H2A; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (127 aa)
his-35Histone H2A; Belongs to the histone H2A family. (127 aa)
nap-1Nucleosome Assembly Protein; Belongs to the nucleosome assembly protein (NAP) family. (316 aa)
his-33Histone H2A. (127 aa)
his-34Histone H2B 1. (122 aa)
his-7Histone H2A. (127 aa)
his-65Histone H2A. (127 aa)
his-19Histone H2A. (127 aa)
his-21Histone H2A. (127 aa)
his-68Histone H2A. (127 aa)
his-16Histone H2A. (127 aa)
his-15Histone H2B 1. (122 aa)
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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