Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| B0034.1 | cdh-3 | B0034.1.1 | ZK112.7.1 | Uncharacterized protein. | Cadherin-3; Cell adhesion protein involved in the control of epithelial morphogenesis. Together with metalloproteinase zmp-1 and hemicentin him-4, plays a role in anchor cell (AC) invasion during postembryonic vulval development. | 0.741 |
| B0034.1 | ceh-2 | B0034.1.1 | C27A12.5.1 | Uncharacterized protein. | Homeobox protein ceh-2; Required for activity of the M3 pharyngeal motor neuron. Belongs to the EMX homeobox family. | 0.758 |
| B0034.1 | dhs-31 | B0034.1.1 | T04B2.6.1 | Uncharacterized protein. | DeHydrogenases, Short chain; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.897 |
| B0034.1 | egl-26 | B0034.1.1 | C23H3.1a.1 | Uncharacterized protein. | LRAT domain-containing protein. | 0.660 |
| B0034.1 | lin-11 | B0034.1.1 | ZC247.3.1 | Uncharacterized protein. | Protein lin-11; Probable transcription factor which is required for asymmetric division of vulval blast cells. Involved in olfactory plasticity probably by regulating the expression of transcription factor mbr-1 in RIF neurons. Plays a role in the chemorepulsive response toward ascaroside pheromones mediated by the ADL sensory neurons, probably by regulating E-box motif 5'-CANNTG-3' containing target genes in the ADL neurons. Plays a role in the differentiation of the ADL sensory neurons. | 0.420 |
| B0034.1 | pepm-1 | B0034.1.1 | F47B8.6.1 | Uncharacterized protein. | PEPtidase M1 domain containing. | 0.898 |
| B0034.1 | zmp-1 | B0034.1.1 | EGAP1.3.1 | Uncharacterized protein. | Matrix metalloproteinase-A; Metalloprotease which, together with cadherin cdh-3 and hemicentin him-4, plays a role in anchor cell (AC) invasion during postembryonic vulval development probably by promoting the degradation of the basement membrane separating the gonad from the vulva epithelium. | 0.619 |
| ZC247.1 | ZC247.2 | ZC247.1.1 | ZC247.2.1 | Uncharacterized protein. | Uncharacterized protein. | 0.972 |
| ZC247.1 | lin-11 | ZC247.1.1 | ZC247.3.1 | Uncharacterized protein. | Protein lin-11; Probable transcription factor which is required for asymmetric division of vulval blast cells. Involved in olfactory plasticity probably by regulating the expression of transcription factor mbr-1 in RIF neurons. Plays a role in the chemorepulsive response toward ascaroside pheromones mediated by the ADL sensory neurons, probably by regulating E-box motif 5'-CANNTG-3' containing target genes in the ADL neurons. Plays a role in the differentiation of the ADL sensory neurons. | 0.762 |
| ZC247.2 | ZC247.1 | ZC247.2.1 | ZC247.1.1 | Uncharacterized protein. | Uncharacterized protein. | 0.972 |
| ZC247.2 | lin-11 | ZC247.2.1 | ZC247.3.1 | Uncharacterized protein. | Protein lin-11; Probable transcription factor which is required for asymmetric division of vulval blast cells. Involved in olfactory plasticity probably by regulating the expression of transcription factor mbr-1 in RIF neurons. Plays a role in the chemorepulsive response toward ascaroside pheromones mediated by the ADL sensory neurons, probably by regulating E-box motif 5'-CANNTG-3' containing target genes in the ADL neurons. Plays a role in the differentiation of the ADL sensory neurons. | 0.715 |
| cdh-3 | B0034.1 | ZK112.7.1 | B0034.1.1 | Cadherin-3; Cell adhesion protein involved in the control of epithelial morphogenesis. Together with metalloproteinase zmp-1 and hemicentin him-4, plays a role in anchor cell (AC) invasion during postembryonic vulval development. | Uncharacterized protein. | 0.741 |
| cdh-3 | ceh-2 | ZK112.7.1 | C27A12.5.1 | Cadherin-3; Cell adhesion protein involved in the control of epithelial morphogenesis. Together with metalloproteinase zmp-1 and hemicentin him-4, plays a role in anchor cell (AC) invasion during postembryonic vulval development. | Homeobox protein ceh-2; Required for activity of the M3 pharyngeal motor neuron. Belongs to the EMX homeobox family. | 0.716 |
| cdh-3 | dhs-31 | ZK112.7.1 | T04B2.6.1 | Cadherin-3; Cell adhesion protein involved in the control of epithelial morphogenesis. Together with metalloproteinase zmp-1 and hemicentin him-4, plays a role in anchor cell (AC) invasion during postembryonic vulval development. | DeHydrogenases, Short chain; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.813 |
| cdh-3 | egl-26 | ZK112.7.1 | C23H3.1a.1 | Cadherin-3; Cell adhesion protein involved in the control of epithelial morphogenesis. Together with metalloproteinase zmp-1 and hemicentin him-4, plays a role in anchor cell (AC) invasion during postembryonic vulval development. | LRAT domain-containing protein. | 0.554 |
| cdh-3 | egl-43 | ZK112.7.1 | R53.3a.1 | Cadherin-3; Cell adhesion protein involved in the control of epithelial morphogenesis. Together with metalloproteinase zmp-1 and hemicentin him-4, plays a role in anchor cell (AC) invasion during postembryonic vulval development. | Uncharacterized protein. | 0.707 |
| cdh-3 | him-4 | ZK112.7.1 | F15G9.4d.1 | Cadherin-3; Cell adhesion protein involved in the control of epithelial morphogenesis. Together with metalloproteinase zmp-1 and hemicentin him-4, plays a role in anchor cell (AC) invasion during postembryonic vulval development. | EGF-like domain-containing protein. | 0.741 |
| cdh-3 | nhr-67 | ZK112.7.1 | C08F8.8.1 | Cadherin-3; Cell adhesion protein involved in the control of epithelial morphogenesis. Together with metalloproteinase zmp-1 and hemicentin him-4, plays a role in anchor cell (AC) invasion during postembryonic vulval development. | Nuclear hormone receptor family member nhr-67; Orphan nuclear receptor. In males, plays an essential role in the migration of the linker cell which guides gonad elongation during the L3 and L4 stages of larval development by negatively regulating the expression of netrin receptor unc-5 at the mid-L3 stage. | 0.667 |
| cdh-3 | pepm-1 | ZK112.7.1 | F47B8.6.1 | Cadherin-3; Cell adhesion protein involved in the control of epithelial morphogenesis. Together with metalloproteinase zmp-1 and hemicentin him-4, plays a role in anchor cell (AC) invasion during postembryonic vulval development. | PEPtidase M1 domain containing. | 0.741 |
| cdh-3 | zmp-1 | ZK112.7.1 | EGAP1.3.1 | Cadherin-3; Cell adhesion protein involved in the control of epithelial morphogenesis. Together with metalloproteinase zmp-1 and hemicentin him-4, plays a role in anchor cell (AC) invasion during postembryonic vulval development. | Matrix metalloproteinase-A; Metalloprotease which, together with cadherin cdh-3 and hemicentin him-4, plays a role in anchor cell (AC) invasion during postembryonic vulval development probably by promoting the degradation of the basement membrane separating the gonad from the vulva epithelium. | 0.890 |
page 1 of 5