Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| F13B12.1 | T24H10.1 | F13B12.1.1 | T24H10.1.1 | IWS1-like protein. | Putative transcription elongation factor S-II; Necessary for efficient RNA polymerase II transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by S-II allows the resumption of elongation from the new 3'-terminus (By similarity). Belongs to the TFS-II family. | 0.949 |
| F13B12.1 | ZK973.1 | F13B12.1.1 | ZK973.1.1 | IWS1-like protein. | S1 motif domain-containing protein. | 0.929 |
| F13B12.1 | ama-1 | F13B12.1.1 | F36A4.7.2 | IWS1-like protein. | DNA-directed RNA polymerase II subunit RPB1; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Largest and catalytic component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Forms the polymerase active center together with the second largest subunit. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. RPB1 is part of the core element with the central large cl [...] | 0.941 |
| F13B12.1 | cdc-73 | F13B12.1.1 | F35F11.1.1 | IWS1-like protein. | Cell division cycle protein 73; Component of the PAF1 complex which is a multifunctional complex involved in transcription initiation via genetic interactions with TATA-binding proteins, elongation and transcription-coupled histone modification; Belongs to the CDC73 family. | 0.647 |
| F13B12.1 | cdk-12 | F13B12.1.1 | B0285.1b.1 | IWS1-like protein. | Cyclin-dependent kinase 12; Cyclin-dependent kinase which displays CTD kinase activity: hyperphosphorylates 'Ser-2' in the C-terminal heptapeptide repeat domain (CTD) of the largest RNA polymerase II subunit, thereby acting as a key regulator of transcription elongation. Required for normal reproduction. | 0.522 |
| F13B12.1 | ctr-9 | F13B12.1.1 | B0464.2a.1 | IWS1-like protein. | RNA polymerase-associated protein CTR9; Component of the PAF1 complex which is a multifunctional complex involved in transcription initiation via genetic interactions with TATA-binding proteins, elongation and transcription-coupled histone modification (By similarity). Ctr-9 is required for epidermal microtubule organization during morphogenesis. | 0.921 |
| F13B12.1 | eaf-1 | F13B12.1.1 | D1007.16.1 | IWS1-like protein. | EAF domain-containing protein. | 0.835 |
| F13B12.1 | ell-1 | F13B12.1.1 | Y24D9A.1a.2 | IWS1-like protein. | Occludin_ELL domain-containing protein. | 0.800 |
| F13B12.1 | emb-5 | F13B12.1.1 | T04A8.14.1 | IWS1-like protein. | Suppressor of Ty 6 homolog; May regulate transcriptional elongation by RNA polymerase II. Required for several aspects of morphogenesis of C.elegans, including regulation of division in the germline and gut and specification of ventral-uterine precursor cell fate; Belongs to the SPT6 family. | 0.998 |
| F13B12.1 | hmg-3 | F13B12.1.1 | C32F10.5.1 | IWS1-like protein. | FACT complex subunit ssrp1-B; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment [...] | 0.794 |
| F13B12.1 | hmg-4 | F13B12.1.1 | T20B12.8.1 | IWS1-like protein. | FACT complex subunit SSRP1-A; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment [...] | 0.896 |
| F13B12.1 | leo-1 | F13B12.1.1 | B0035.11.1 | IWS1-like protein. | RNA polymerase-associated protein LEO1; Component of the PAF1 complex which is a multifunctional complex involved in transcription initiation via genetic interactions with TATA-binding proteins, elongation and transcription-coupled histone modification. | 0.888 |
| F13B12.1 | pafo-1 | F13B12.1.1 | C55A6.9.1 | IWS1-like protein. | RNA polymerase II-associated factor 1 homolog; Component of the PAF1 complex which is a multifunctional complex involved in transcription initiation via genetic interactions with TATA-binding proteins, elongation and transcription-coupled histone modification. | 0.561 |
| F13B12.1 | rpb-11 | F13B12.1.1 | W01G7.3.2 | IWS1-like protein. | Probable DNA-directed RNA polymerase II subunit RPB11; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. RPB11 is part of the core element with the central large cleft (By similarity). | 0.759 |
| F13B12.1 | rpb-2 | F13B12.1.1 | C26E6.4.1 | IWS1-like protein. | DNA-directed RNA polymerase II subunit RPB2; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Second largest component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Proposed to contribute to the polymerase catalytic activity and forms the polymerase active center together with the largest subunit. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. RPB2 is [...] | 0.901 |
| F13B12.1 | rpb-3 | F13B12.1.1 | C36B1.3.1 | IWS1-like protein. | RPOLD domain-containing protein. | 0.973 |
| F13B12.1 | rpb-4 | F13B12.1.1 | F43E2.2.1 | IWS1-like protein. | RPOL4c domain-containing protein. | 0.503 |
| F13B12.1 | rpb-6 | F13B12.1.1 | C06A1.5.1 | IWS1-like protein. | Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2; DNA-dependent RNA polymerases catalyze the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. Pol II is the central component of the basal RNA polymerase II transcription machinery. Pols are composed of mobile elements that move relative to each other. In Pol II, RPB6 is part of t [...] | 0.548 |
| F13B12.1 | rpb-7 | F13B12.1.1 | Y54E10BR.6.1 | IWS1-like protein. | S1 motif domain-containing protein. | 0.532 |
| F13B12.1 | rpb-9 | F13B12.1.1 | Y97E10AR.5.1 | IWS1-like protein. | TFIIS-type domain-containing protein; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.553 |
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