STRINGSTRING
snpc-3.1 snpc-3.1 ife-3 ife-3 snpc-1.1 snpc-1.1 tofu-1 tofu-1 C35D10.13 C35D10.13 tofu-6 tofu-6 snpc-1.3 snpc-1.3 pid-1 pid-1 tofu-2 tofu-2 prde-1 prde-1 snpc-4 snpc-4 F35G12.11 F35G12.11 tofu-4 tofu-4 R05D3.3 R05D3.3 R05F9.11 R05F9.11 snpc-3.4 snpc-3.4 erh-1 erh-1 tofu-5 tofu-5 mxt-1 mxt-1 Y23H5A.3 Y23H5A.3 snpc-1.2 snpc-1.2 snpc-3.3 snpc-3.3 Y48G1BL.8 Y48G1BL.8 snpc-3.2 snpc-3.2 tofu-7 tofu-7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
snpc-3.1SNAPc (Small Nuclear RNA Activating Complex) homolog. (425 aa)
ife-3Eukaryotic translation initiation factor 4E-3; Recognizes and binds the 7-methylguanosine-containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures. All 5 eIF4E proteins bind monomethyl cap structures. Only ife-1, ife-2 and ife-5 bind trimethyl cap structures which result from trans-splicing. Translation of trimethyl cap structure mRNAs may be regulated by intracellular redox state; disulfide bonds change the width and depth of the cap-binding cavity determining selectivit [...] (251 aa)
snpc-1.1SNAPc (Small Nuclear RNA Activating Complex) homolog. (473 aa)
tofu-1Twenty One u-rna (21U-RNA) biogenesis Fouled Up. (373 aa)
C35D10.13Twenty-One u (U) antagoniST. (142 aa)
tofu-6Embryonic developmental protein tofu-6; Required maternally for early embryonic cell divisions. May have a role in DNA replication. (367 aa)
snpc-1.3SNAPc (Small Nuclear RNA Activating Complex) homolog. (426 aa)
pid-121U-RNA biogenesis factor pid-1; Plays a role in the biogenesis of 21U-RNAs which guide the piwi protein prg-1 to its DNA targets for silencing. (169 aa)
tofu-2B30.2/SPRY domain-containing protein. (433 aa)
prde-1piRNA biogenesis factor prde-1; Nuclear factor required for the production of piwi- interacting RNA (piRNA) precursors. Specifically required for piRNAs produced from loci associated with the Ruby motif. Promotes binding of the transcription factor snpc-4 at piRNA genomic clusters. Required for normal fertility. (526 aa)
snpc-4snRNA-activating protein complex subunit 4 homolog; Binds to the promoter regions of RNA polymerase II and III small-nuclear RNA genes, type 3 RNA polymerase III non-coding RNA genes, small nucleolar RNAs and transfer RNA genes. Required for expression of mature 21U-RNAs. (944 aa)
F35G12.11Enhancer of rudimentary homolog; May have a role in the cell cycle. (113 aa)
tofu-4Twenty One u-rna (21U-RNA) biogenesis Fouled Up. (412 aa)
R05D3.3Putative zinc finger protein R05D3.3. (421 aa)
R05F9.11Uncharacterized protein. (525 aa)
snpc-3.4SNAPc (Small Nuclear RNA Activating Complex) homolog. (418 aa)
erh-1Enhancer of rudimentary homolog; May have a role in the cell cycle. (103 aa)
tofu-5Twenty One u-rna (21U-RNA) biogenesis Fouled Up. (311 aa)
mxt-1Eukaryotic translation initiation factor 4E-binding protein Mextli homolog; Plays a role in promoting translation. (507 aa)
Y23H5A.3Uncharacterized protein. (307 aa)
snpc-1.2SNAPc (Small Nuclear RNA Activating Complex) homolog. (445 aa)
snpc-3.3SNAPc (Small Nuclear RNA Activating Complex) homolog. (259 aa)
Y48G1BL.8Uncharacterized protein. (109 aa)
snpc-3.2SNAPc (Small Nuclear RNA Activating Complex) homolog. (425 aa)
tofu-7Twenty One u-rna (21U-RNA) biogenesis Fouled Up. (279 aa)
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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