Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| alg-2 | dcr-1 | T07D3.7a.1 | K12H4.8.2 | Protein argonaute; Belongs to the argonaute family. | Death-promoting deoxyribonuclease; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs. Seems to process the precursor of the small temporal RNA let-7 which is involved in developmental timing. Belongs to the helicase family. Dicer subfamily. | 0.981 |
| alg-2 | ego-1 | T07D3.7a.1 | F26A3.3.1 | Protein argonaute; Belongs to the argonaute family. | RNA-directed RNA polymerase related EGO-1. | 0.426 |
| alg-2 | ergo-1 | T07D3.7a.1 | R09A1.1a.1 | Protein argonaute; Belongs to the argonaute family. | Piwi-like protein ergo-1; Argonaute protein required for gene silencing in the endogenous RNA interference (RNAi) pathway. Involved in the 26G RNAi pathway and associates with both unmethylated and methylated 26G small interfering RNAs (26G- siRNAs), which are a class of 26 nucleotide siRNAs that possess a guanine residue at the 5'-end. Associated 26G-siRNAs are methylated by the methyltransferase henn-1, which stabilizes the siRNAs. Association with 26G- siRNAs is required for the biogenesis of secondary 22G-siRNAs (a class of 22 nucleotide siRNAs that possess a triphosphorylated guan [...] | 0.930 |
| alg-2 | ppw-1 | T07D3.7a.1 | C18E3.7c.3 | Protein argonaute; Belongs to the argonaute family. | Piwi-like protein; Belongs to the argonaute family. | 0.511 |
| alg-2 | rde-1 | T07D3.7a.1 | K08H10.7.1 | Protein argonaute; Belongs to the argonaute family. | RNA interference promoting factor RDE-1. | 0.803 |
| alg-2 | rde-4 | T07D3.7a.1 | T20G5.11.1 | Protein argonaute; Belongs to the argonaute family. | RNA interference promoting factor. | 0.929 |
| alg-2 | sago-2 | T07D3.7a.1 | F56A6.1a.1 | Protein argonaute; Belongs to the argonaute family. | Piwi-like protein; Belongs to the argonaute family. | 0.532 |
| dcr-1 | alg-2 | K12H4.8.2 | T07D3.7a.1 | Death-promoting deoxyribonuclease; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs. Seems to process the precursor of the small temporal RNA let-7 which is involved in developmental timing. Belongs to the helicase family. Dicer subfamily. | Protein argonaute; Belongs to the argonaute family. | 0.981 |
| dcr-1 | drh-1 | K12H4.8.2 | F15B10.2a.1 | Death-promoting deoxyribonuclease; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs. Seems to process the precursor of the small temporal RNA let-7 which is involved in developmental timing. Belongs to the helicase family. Dicer subfamily. | Dicer-related helicase. | 0.845 |
| dcr-1 | drh-3 | K12H4.8.2 | D2005.5.1 | Death-promoting deoxyribonuclease; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs. Seems to process the precursor of the small temporal RNA let-7 which is involved in developmental timing. Belongs to the helicase family. Dicer subfamily. | Dicer Related Helicase. | 0.925 |
| dcr-1 | ego-1 | K12H4.8.2 | F26A3.3.1 | Death-promoting deoxyribonuclease; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs. Seems to process the precursor of the small temporal RNA let-7 which is involved in developmental timing. Belongs to the helicase family. Dicer subfamily. | RNA-directed RNA polymerase related EGO-1. | 0.738 |
| dcr-1 | ergo-1 | K12H4.8.2 | R09A1.1a.1 | Death-promoting deoxyribonuclease; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs. Seems to process the precursor of the small temporal RNA let-7 which is involved in developmental timing. Belongs to the helicase family. Dicer subfamily. | Piwi-like protein ergo-1; Argonaute protein required for gene silencing in the endogenous RNA interference (RNAi) pathway. Involved in the 26G RNAi pathway and associates with both unmethylated and methylated 26G small interfering RNAs (26G- siRNAs), which are a class of 26 nucleotide siRNAs that possess a guanine residue at the 5'-end. Associated 26G-siRNAs are methylated by the methyltransferase henn-1, which stabilizes the siRNAs. Association with 26G- siRNAs is required for the biogenesis of secondary 22G-siRNAs (a class of 22 nucleotide siRNAs that possess a triphosphorylated guan [...] | 0.931 |
| dcr-1 | ppw-1 | K12H4.8.2 | C18E3.7c.3 | Death-promoting deoxyribonuclease; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs. Seems to process the precursor of the small temporal RNA let-7 which is involved in developmental timing. Belongs to the helicase family. Dicer subfamily. | Piwi-like protein; Belongs to the argonaute family. | 0.792 |
| dcr-1 | rde-1 | K12H4.8.2 | K08H10.7.1 | Death-promoting deoxyribonuclease; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs. Seems to process the precursor of the small temporal RNA let-7 which is involved in developmental timing. Belongs to the helicase family. Dicer subfamily. | RNA interference promoting factor RDE-1. | 0.970 |
| dcr-1 | rde-4 | K12H4.8.2 | T20G5.11.1 | Death-promoting deoxyribonuclease; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs. Seems to process the precursor of the small temporal RNA let-7 which is involved in developmental timing. Belongs to the helicase family. Dicer subfamily. | RNA interference promoting factor. | 0.999 |
| dcr-1 | rrf-1 | K12H4.8.2 | F26A3.8a.1 | Death-promoting deoxyribonuclease; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs. Seems to process the precursor of the small temporal RNA let-7 which is involved in developmental timing. Belongs to the helicase family. Dicer subfamily. | RNA-dependent RNA polymerase Family. | 0.797 |
| dcr-1 | sago-2 | K12H4.8.2 | F56A6.1a.1 | Death-promoting deoxyribonuclease; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs. Seems to process the precursor of the small temporal RNA let-7 which is involved in developmental timing. Belongs to the helicase family. Dicer subfamily. | Piwi-like protein; Belongs to the argonaute family. | 0.845 |
| drh-1 | dcr-1 | F15B10.2a.1 | K12H4.8.2 | Dicer-related helicase. | Death-promoting deoxyribonuclease; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs. Seems to process the precursor of the small temporal RNA let-7 which is involved in developmental timing. Belongs to the helicase family. Dicer subfamily. | 0.845 |
| drh-1 | drh-3 | F15B10.2a.1 | D2005.5.1 | Dicer-related helicase. | Dicer Related Helicase. | 0.602 |
| drh-1 | ego-1 | F15B10.2a.1 | F26A3.3.1 | Dicer-related helicase. | RNA-directed RNA polymerase related EGO-1. | 0.754 |
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