26 items (Caenorhabditis elegans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	mrps-30	Mitochondrial Ribosomal Protein, Small. (523 aa)
	mrps-17	28S ribosomal protein S17, mitochondrial; Belongs to the universal ribosomal protein uS17 family. (160 aa)
	mrps-22	Mitochondrial Ribosomal Protein, Small. (418 aa)
	dap-3	Mammalian cell Death Associated Protein related. (375 aa)
	C24D10.6	CHCH domain-containing protein. (161 aa)
	mrpl-34	L51_S25_CI-B8 domain-containing protein. (189 aa)
	mrps-31	28S ribosomal protein S31, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mS31 family. (383 aa)
	mrps-26	Mitochondrial Ribosomal Protein, Small. (255 aa)
	mrps-5	Putative 28S ribosomal protein S5, mitochondrial; Belongs to the universal ribosomal protein uS5 family. (436 aa)
	mrps-9	Probable 40S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family. (392 aa)
	mrps-33	Mitochondrial Ribosomal Protein, Small. (126 aa)
	mrps-21	Mitochondrial Ribosomal Protein, Small. (113 aa)
	mrps-24	28S ribosomal protein S24, mitochondrial; Belongs to the universal ribosomal protein uS3 family. (164 aa)
	mrps-16	Probable 28S ribosomal protein S16, mitochondrial; Belongs to the bacterial ribosomal protein bS16 family. (147 aa)
	mrps-15	28S ribosomal protein S15, mitochondrial; Belongs to the universal ribosomal protein uS15 family. (330 aa)
	mrps-34	Mitochondrial Ribosomal Protein, Small. (228 aa)
	mrps-14	Probable 40S ribosomal protein S14, mitochondrial; Belongs to the universal ribosomal protein uS14 family. (199 aa)
	mrps-12	Mitochondrial Ribosomal Protein, Small; Belongs to the universal ribosomal protein uS12 family. (157 aa)
	mrps-2	Mitochondrial Ribosomal Protein, Small. (264 aa)
	let-630	Uncharacterized protein. (664 aa)
	mrps-10	Probable 28S ribosomal protein S10, mitochondrial; Ribosomal protein required for normal mitochondrial function and normal larval development. Thought to have a role in insulin/IGF signaling. (156 aa)
	mrps-35	MRP-S28 domain-containing protein. (365 aa)
	mrps-28	Mitochondrial Ribosomal Protein, Small. (172 aa)
	mrps-25	Probable 28S ribosomal protein S25, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mS25 family. (170 aa)
	mrps-7	28S ribosomal protein S7, mitochondrial; Belongs to the universal ribosomal protein uS7 family. (222 aa)
	mrps-23	Probable 28S ribosomal protein S23, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mS23 family. (133 aa)

Your Current Organism:

Caenorhabditis elegans

NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C24D10.6	dap-3	C24D10.6.1	C14A4.2.1	CHCH domain-containing protein.	Mammalian cell Death Associated Protein related.	0.975
C24D10.6	let-630	C24D10.6.1	Y110A7A.19.1	CHCH domain-containing protein.	Uncharacterized protein.	0.977
C24D10.6	mrpl-34	C24D10.6.1	C25A1.13.1	CHCH domain-containing protein.	L51_S25_CI-B8 domain-containing protein.	0.931
C24D10.6	mrps-10	C24D10.6.1	Y37D8A.18.1	CHCH domain-containing protein.	Probable 28S ribosomal protein S10, mitochondrial; Ribosomal protein required for normal mitochondrial function and normal larval development. Thought to have a role in insulin/IGF signaling.	0.986
C24D10.6	mrps-12	C24D10.6.1	T03D8.2.1	CHCH domain-containing protein.	Mitochondrial Ribosomal Protein, Small; Belongs to the universal ribosomal protein uS12 family.	0.901
C24D10.6	mrps-14	C24D10.6.1	T01E8.6.1	CHCH domain-containing protein.	Probable 40S ribosomal protein S14, mitochondrial; Belongs to the universal ribosomal protein uS14 family.	0.986
C24D10.6	mrps-15	C24D10.6.1	K07A12.7.1	CHCH domain-containing protein.	28S ribosomal protein S15, mitochondrial; Belongs to the universal ribosomal protein uS15 family.	0.980
C24D10.6	mrps-16	C24D10.6.1	F56D1.3.1	CHCH domain-containing protein.	Probable 28S ribosomal protein S16, mitochondrial; Belongs to the bacterial ribosomal protein bS16 family.	0.991
C24D10.6	mrps-17	C24D10.6.1	C05D11.10.1	CHCH domain-containing protein.	28S ribosomal protein S17, mitochondrial; Belongs to the universal ribosomal protein uS17 family.	0.984
C24D10.6	mrps-2	C24D10.6.1	T23B12.3.2	CHCH domain-containing protein.	Mitochondrial Ribosomal Protein, Small.	0.978
C24D10.6	mrps-21	C24D10.6.1	F29B9.10.1	CHCH domain-containing protein.	Mitochondrial Ribosomal Protein, Small.	0.980
C24D10.6	mrps-22	C24D10.6.1	C14A4.14.1	CHCH domain-containing protein.	Mitochondrial Ribosomal Protein, Small.	0.976
C24D10.6	mrps-23	C24D10.6.1	ZK1098.7.2	CHCH domain-containing protein.	Probable 28S ribosomal protein S23, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mS23 family.	0.987
C24D10.6	mrps-24	C24D10.6.1	F33D4.8.1	CHCH domain-containing protein.	28S ribosomal protein S24, mitochondrial; Belongs to the universal ribosomal protein uS3 family.	0.986
C24D10.6	mrps-25	C24D10.6.1	Y55F3AM.1.1	CHCH domain-containing protein.	Probable 28S ribosomal protein S25, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mS25 family.	0.958
C24D10.6	mrps-26	C24D10.6.1	C34E10.11.1	CHCH domain-containing protein.	Mitochondrial Ribosomal Protein, Small.	0.924
C24D10.6	mrps-28	C24D10.6.1	Y43F8C.8.1	CHCH domain-containing protein.	Mitochondrial Ribosomal Protein, Small.	0.986
C24D10.6	mrps-30	C24D10.6.1	B0511.8.2	CHCH domain-containing protein.	Mitochondrial Ribosomal Protein, Small.	0.973
C24D10.6	mrps-31	C24D10.6.1	C32A3.2.1	CHCH domain-containing protein.	28S ribosomal protein S31, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mS31 family.	0.976
C24D10.6	mrps-33	C24D10.6.1	F21D5.8.1	CHCH domain-containing protein.	Mitochondrial Ribosomal Protein, Small.	0.986