STRINGSTRING
let-504 let-504 mog-5 mog-5 F37A4.2 F37A4.2 prp-17 prp-17 F53F4.14 F53F4.14 K01G5.8 K01G5.8 cacn-1 cacn-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
let-504Nkap_C domain-containing protein. (504 aa)
mog-5Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5; Could act late in the splicing of pre-mRNA and mediate the release of the spliced mRNA from spliceosomes; Belongs to the DEAD box helicase family. DEAH subfamily. DDX8/PRP22 sub-subfamily. (1200 aa)
F37A4.2Uncharacterized protein F37A4.2. (189 aa)
prp-17WD_REPEATS_REGION domain-containing protein. (567 aa)
F53F4.14Sde2_N_Ubi domain-containing protein. (500 aa)
K01G5.8Uncharacterized protein. (107 aa)
cacn-1Cactin; Plays a role during early embryonic development. Required for the distal tip cell migration at the end of larval development and for gonad morphogenesis. (657 aa)
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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