Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| B0495.8 | C50D2.8 | B0495.8a.1 | C50D2.8a.2 | Uncharacterized protein B0495.8; Belongs to the Luc7 family. | Uncharacterized protein. | 0.701 |
| B0495.8 | F08B4.7 | B0495.8a.1 | F08B4.7.1 | Uncharacterized protein B0495.8; Belongs to the Luc7 family. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.982 |
| B0495.8 | F25B4.5 | B0495.8a.1 | F25B4.5.1 | Uncharacterized protein B0495.8; Belongs to the Luc7 family. | Uncharacterized protein. | 0.977 |
| B0495.8 | Y119D3B.12 | B0495.8a.1 | Y119D3B.12a.2 | Uncharacterized protein B0495.8; Belongs to the Luc7 family. | Uncharacterized protein. | 0.739 |
| B0495.8 | mog-2 | B0495.8a.1 | H20J04.8.2 | Uncharacterized protein B0495.8; Belongs to the Luc7 family. | Probable U2 small nuclear ribonucleoprotein A; This protein is associated with sn-RNP U2. It helps the A' protein to bind stem loop IV of U2 snRNA. Required maternally for early embryonic development and zygotically for germline and somatic development. Has a role in the switch from mitosis to meiosis. Might function in alternative splicing. | 0.976 |
| B0495.8 | repo-1 | B0495.8a.1 | F11A10.2.1 | Uncharacterized protein B0495.8; Belongs to the Luc7 family. | Matrin-type domain-containing protein. | 0.762 |
| B0495.8 | rsp-3 | B0495.8a.1 | Y111B2A.18.3 | Uncharacterized protein B0495.8; Belongs to the Luc7 family. | Probable splicing factor, arginine/serine-rich 3; Plays an essential role in embryogenesis. | 0.522 |
| B0495.8 | sftb-1 | B0495.8a.1 | T08A11.2.1 | Uncharacterized protein B0495.8; Belongs to the Luc7 family. | SF3b1 domain-containing protein. | 0.946 |
| B0495.8 | swp-1 | B0495.8a.1 | B0336.9d.1 | Uncharacterized protein B0495.8; Belongs to the Luc7 family. | Protein SWAP; It is a regulator of pre-mRNA splicing (and, possibly, of other RNA processing events). It may regulate its own expression at the level of RNA processing. | 0.735 |
| B0495.8 | uaf-1 | B0495.8a.1 | Y92C3B.2a.1 | Uncharacterized protein B0495.8; Belongs to the Luc7 family. | Splicing factor U2AF 65 kDa subunit; Necessary for the splicing of pre-mRNA. Binds to the polypyrimidine tract of introns early during spliceosome assembly (By similarity). | 0.929 |
| C50D2.8 | B0495.8 | C50D2.8a.2 | B0495.8a.1 | Uncharacterized protein. | Uncharacterized protein B0495.8; Belongs to the Luc7 family. | 0.701 |
| C50D2.8 | F08B4.7 | C50D2.8a.2 | F08B4.7.1 | Uncharacterized protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.891 |
| C50D2.8 | F25B4.5 | C50D2.8a.2 | F25B4.5.1 | Uncharacterized protein. | Uncharacterized protein. | 0.864 |
| C50D2.8 | Y119D3B.12 | C50D2.8a.2 | Y119D3B.12a.2 | Uncharacterized protein. | Uncharacterized protein. | 0.578 |
| C50D2.8 | mog-2 | C50D2.8a.2 | H20J04.8.2 | Uncharacterized protein. | Probable U2 small nuclear ribonucleoprotein A; This protein is associated with sn-RNP U2. It helps the A' protein to bind stem loop IV of U2 snRNA. Required maternally for early embryonic development and zygotically for germline and somatic development. Has a role in the switch from mitosis to meiosis. Might function in alternative splicing. | 0.776 |
| C50D2.8 | repo-1 | C50D2.8a.2 | F11A10.2.1 | Uncharacterized protein. | Matrin-type domain-containing protein. | 0.695 |
| C50D2.8 | rsp-3 | C50D2.8a.2 | Y111B2A.18.3 | Uncharacterized protein. | Probable splicing factor, arginine/serine-rich 3; Plays an essential role in embryogenesis. | 0.408 |
| C50D2.8 | sftb-1 | C50D2.8a.2 | T08A11.2.1 | Uncharacterized protein. | SF3b1 domain-containing protein. | 0.847 |
| C50D2.8 | uaf-1 | C50D2.8a.2 | Y92C3B.2a.1 | Uncharacterized protein. | Splicing factor U2AF 65 kDa subunit; Necessary for the splicing of pre-mRNA. Binds to the polypyrimidine tract of introns early during spliceosome assembly (By similarity). | 0.886 |
| D1007.4 | smi-1 | D1007.4.1 | Y39A3CR.1a.1 | Uncharacterized protein. | Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. | 0.848 |
page 1 of 8