Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| aexr-2 | ctns-1 | C25B8.7.1 | C41C4.7a.1 | G_PROTEIN_RECEP_F1_2 domain-containing protein. | Cystinosin homolog; Thought to transport cystine out of lysosomes (By similarity). May play a role in the degradation of engulfed apoptotic cells. | 0.660 |
| aexr-2 | cup-14 | C25B8.7.1 | Y51H1A.2a.1 | G_PROTEIN_RECEP_F1_2 domain-containing protein. | RUN domain-containing protein. | 0.813 |
| aexr-2 | cup-15 | C25B8.7.1 | F42A8.3.1 | G_PROTEIN_RECEP_F1_2 domain-containing protein. | Coelomocyte uptake defective protein 15; Modulates the transport of substances from the endosomal to lysosomal compartments. Plays a role in lysosome formation and function in coelomocytes. | 0.807 |
| apb-3 | apm-3 | R11A5.1a.1 | F53H8.1.1 | AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. | MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. | 0.999 |
| apb-3 | cup-5 | R11A5.1a.1 | R13A5.1e.2 | AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. | PKD_channel domain-containing protein. | 0.638 |
| apb-3 | glo-1 | R11A5.1a.1 | R07B1.12.1 | AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. | Gut granule LOss. | 0.750 |
| apb-3 | lst-4 | R11A5.1a.1 | Y37A1B.2b.1 | AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. | Sorting nexin lst-4; Involved in the signaling of vulval development by acting as a negative regulator of epidermal growth factor receptor (EGFR) signaling. Aids in phagosomal membrane tubule formation which is required for phagosomal fusion with endosomes and lysosomes. Also recruits rab-7 to phagosomes by an interaction with dyn-1. These are events leading to phagosome maturation which is a step in apoptotic cell corpse clearance. Binds phosphatidylinositol-3,4,5-trisphosphate. Belongs to the sorting nexin family. | 0.506 |
| apb-3 | snpn-1 | R11A5.1a.1 | C02B10.2.1 | AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. | SNAPIN protein homolog; Component of the biogenesis of lysosome-related organelles complex-1 (BLOC-1) involved in gut granule biogenesis. Belongs to the SNAPIN family. | 0.590 |
| apb-3 | snx-1 | R11A5.1a.1 | C05D9.1.1 | AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. | PX domain-containing protein. | 0.612 |
| apb-3 | snx-6 | R11A5.1a.1 | Y59A8B.22a.1 | AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. | PX domain-containing protein. | 0.526 |
| apm-3 | apb-3 | F53H8.1.1 | R11A5.1a.1 | MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. | AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. | 0.999 |
| apm-3 | glo-1 | F53H8.1.1 | R07B1.12.1 | MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. | Gut granule LOss. | 0.725 |
| ccz-1 | glo-1 | F58G11.6.1 | R07B1.12.1 | Uncharacterized protein. | Gut granule LOss. | 0.569 |
| ccz-1 | rab-14 | F58G11.6.1 | K09A9.2.1 | Uncharacterized protein. | RAB family. | 0.725 |
| ccz-1 | rab-7 | F58G11.6.1 | W03C9.3.2 | Uncharacterized protein. | RAB family. | 0.972 |
| ccz-1 | snpn-1 | F58G11.6.1 | C02B10.2.1 | Uncharacterized protein. | SNAPIN protein homolog; Component of the biogenesis of lysosome-related organelles complex-1 (BLOC-1) involved in gut granule biogenesis. Belongs to the SNAPIN family. | 0.558 |
| ccz-1 | snx-1 | F58G11.6.1 | C05D9.1.1 | Uncharacterized protein. | PX domain-containing protein. | 0.602 |
| ccz-1 | unc-108 | F58G11.6.1 | F53F10.4b.1 | Uncharacterized protein. | Uncharacterized protein. | 0.663 |
| ccz-1 | vps-18 | F58G11.6.1 | W06B4.3.1 | Uncharacterized protein. | Vacuolar protein sorting-associated protein 18 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes which are proposed to be involved in the rab-5-to-rab-7 endosome conversion probably implicating sand-1, and via binding SNAREs and SNARE complexes to mediate tethering and docking events during SNARE-mediated membrane fusion (By similarity). The HOPS complex is proposed to be recruited to [...] | 0.991 |
| ced-1 | ctns-1 | Y47H9C.4a.1 | C41C4.7a.1 | Cell death abnormality protein 1; Involved in programmed cell death, also called apoptosis, in both somatic and germ cells. Acts by recruiting ced-6 to phagosomes which enables actin-dependent cytoskeletal reorganization and subsequent engulfment of the apoptotic cell corpse. Has a role in the association of ppk-3 and rab-7 with the phagosomal surface which is necessary for the incorporation of lysosomes to phagosomes during phagosome maturation. Activates the expression of unfolded protein response genes, which are involved in the immune response to live bacteria. | Cystinosin homolog; Thought to transport cystine out of lysosomes (By similarity). May play a role in the degradation of engulfed apoptotic cells. | 0.463 |
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