Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cog-1 | die-1 | R03C1.3a.1 | C18D1.1a.2 | Homeobox domain-containing protein. | C2H2-type domain-containing protein. | 0.805 |
| cog-1 | mls-2 | R03C1.3a.1 | C39E6.4.1 | Homeobox domain-containing protein. | Homeobox domain-containing protein. | 0.402 |
| dex-1 | dyf-7 | D1044.2c.1 | C43C3.3.1 | Dendrite extension defective protein 1; Along with dyf-7, enables neurite growth and maintenance by anchoring amphid dendritic tips during neuron cell body migration in embryonic and larval development. | Protein dyf-7; Required for permeability of amphid and phasmid neurons to external dyes, chemotaxis to ammonium chloride, avoidance of high osmotic stimuli, male mating and dauer formation. Along with dex-1, enables neurite growth and maintenance by anchoring amphid dendritic tips during neuron cell body migration in embryonic and larval development. | 0.963 |
| die-1 | cog-1 | C18D1.1a.2 | R03C1.3a.1 | C2H2-type domain-containing protein. | Homeobox domain-containing protein. | 0.805 |
| dyf-7 | dex-1 | C43C3.3.1 | D1044.2c.1 | Protein dyf-7; Required for permeability of amphid and phasmid neurons to external dyes, chemotaxis to ammonium chloride, avoidance of high osmotic stimuli, male mating and dauer formation. Along with dex-1, enables neurite growth and maintenance by anchoring amphid dendritic tips during neuron cell body migration in embryonic and larval development. | Dendrite extension defective protein 1; Along with dyf-7, enables neurite growth and maintenance by anchoring amphid dendritic tips during neuron cell body migration in embryonic and larval development. | 0.963 |
| grd-1 | grd-2 | R08B4.1b.1 | F46B3.5.1 | GRounDhog (Hedgehog-like family). | GRounDhog (Hedgehog-like family). | 0.430 |
| grd-1 | qua-1 | R08B4.1b.1 | T05C12.10.1 | GRounDhog (Hedgehog-like family). | Protein qua-1; Required for cuticle shedding and normal alae morphology and localization, and subsequently larval development. | 0.479 |
| grd-1 | wrt-1 | R08B4.1b.1 | ZK1290.12.1 | GRounDhog (Hedgehog-like family). | Warthog protein 1 C-product; Intercellular signal essential for a variety of patterning events during development. | 0.544 |
| grd-1 | wrt-4 | R08B4.1b.1 | ZK678.5.1 | GRounDhog (Hedgehog-like family). | Warthog protein 4 C-product; Intercellular signal essential for a variety of patterning events during development. | 0.424 |
| grd-2 | grd-1 | F46B3.5.1 | R08B4.1b.1 | GRounDhog (Hedgehog-like family). | GRounDhog (Hedgehog-like family). | 0.430 |
| grd-2 | wrt-1 | F46B3.5.1 | ZK1290.12.1 | GRounDhog (Hedgehog-like family). | Warthog protein 1 C-product; Intercellular signal essential for a variety of patterning events during development. | 0.411 |
| grd-2 | wrt-4 | F46B3.5.1 | ZK678.5.1 | GRounDhog (Hedgehog-like family). | Warthog protein 4 C-product; Intercellular signal essential for a variety of patterning events during development. | 0.660 |
| grd-8 | vab-3 | C37C3.4.1 | F14F3.1a.1 | Ground-like domain-containing protein. | Homeobox domain-containing protein. | 0.485 |
| grd-9 | qua-1 | C04E6.6.1 | T05C12.10.1 | Ground-like domain-containing protein. | Protein qua-1; Required for cuticle shedding and normal alae morphology and localization, and subsequently larval development. | 0.489 |
| grd-9 | wrt-1 | C04E6.6.1 | ZK1290.12.1 | Ground-like domain-containing protein. | Warthog protein 1 C-product; Intercellular signal essential for a variety of patterning events during development. | 0.660 |
| hum-6 | ptr-4 | T10H10.1.1 | C45B2.7.1 | Unconventional myosin heavy chain 6; Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Their highly divergent tails are presumed to bind to membranous compartments, which would be moved relative to actin filaments (By similarity). | SSD domain-containing protein. | 0.408 |
| lin-32 | mab-5 | T14F9.5.1 | C08C3.3.1 | Protein lin-32; Essential for the specification of the neuroblast cell fate in the development of peripheral sense organs. Its role in the generation of sensory neurons may be through positively regulating the expression of the zinc finger protein ztf-11 during postdeirid neurogenesis. | Homeobox protein mab-5; Transcription factor that binds to the promoter region of the transcription factor lin-39 to repress its expression in Q neuroblasts and thereby direct left Q neuroblast (QL) daughter cell migration. During postembryonic development, required for posterior-specific pattern formation. Within the posterior body region, controls epidermal, neuronal, and mesodermal cell differentiation. Belongs to the Antp homeobox family. | 0.779 |
| lin-32 | vab-3 | T14F9.5.1 | F14F3.1a.1 | Protein lin-32; Essential for the specification of the neuroblast cell fate in the development of peripheral sense organs. Its role in the generation of sensory neurons may be through positively regulating the expression of the zinc finger protein ztf-11 during postdeirid neurogenesis. | Homeobox domain-containing protein. | 0.760 |
| mab-20 | plx-1 | Y71G12B.20a.1 | Y55F3AL.1b.1 | Semaphorin-2A; Regulates the formation or stabilization of cell-cell contacts at several stages of epithelial morphogenesis. In early embryonic development, required for proper ventral closure of the epidermis. During male tail morphogenesis, regulates precursor cell sorting and allows the formation of distinct sensory rays. Seems to control cell-cell contact formation through 2 parallel pathways, one involving efn-4 and one involving plx-2 and unc-129. Involved in axon guidance. Probably by binding receptor plx-2, regulates fln-1-mediated remodeling of the actin cytoskeleton and thus [...] | Sema domain-containing protein. | 0.918 |
| mab-20 | smp-1 | Y71G12B.20a.1 | Y54E5B.1a.1 | Semaphorin-2A; Regulates the formation or stabilization of cell-cell contacts at several stages of epithelial morphogenesis. In early embryonic development, required for proper ventral closure of the epidermis. During male tail morphogenesis, regulates precursor cell sorting and allows the formation of distinct sensory rays. Seems to control cell-cell contact formation through 2 parallel pathways, one involving efn-4 and one involving plx-2 and unc-129. Involved in axon guidance. Probably by binding receptor plx-2, regulates fln-1-mediated remodeling of the actin cytoskeleton and thus [...] | Semaphorin-1A; May function in growth cone guidance; Belongs to the semaphorin family. | 0.878 |
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