45 items (Caenorhabditis elegans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	mrps-18B	Mitochondrial Ribosomal Protein, Small. (238 aa)
	mrps-2	Mitochondrial Ribosomal Protein, Small. (264 aa)
	sars-2	AA_TRNA_LIGASE_II domain-containing protein. (441 aa)
	W03F8.3	Probable peptide chain release factor 1, mitochondrial; Mitochondrial peptide chain release factor that directs the termination of translation in response to the peptide chain termination codons UAA and UAG. (389 aa)
	mrps-11	Mitochondrial Ribosomal Protein, Small. (208 aa)
	let-630	Uncharacterized protein. (664 aa)
	Y119D3B.14	Tr-type G domain-containing protein. (731 aa)
	mrps-35	MRP-S28 domain-containing protein. (365 aa)
	Y41D4A.6	Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the amidase family. GatA subfamily. (454 aa)
	mrps-7	28S ribosomal protein S7, mitochondrial; Belongs to the universal ribosomal protein uS7 family. (222 aa)
	Y66D12A.7	Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). (175 aa)
	Y67D2.4	CP-type G domain-containing protein. (348 aa)
	tufm-1	Tr-type G domain-containing protein. (496 aa)
	Y95D11A.1	Uncharacterized protein. (144 aa)
	mrps-18A	Mitochondrial Ribosomal Protein, Small. (183 aa)
	lars-2	Anticodon_1 domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (859 aa)
	mrpl-47	Mitochondrial Ribosomal Protein, Large. (234 aa)
	mrps-17	28S ribosomal protein S17, mitochondrial; Belongs to the universal ribosomal protein uS17 family. (160 aa)
	C24D10.6	CHCH domain-containing protein. (161 aa)
	mrpl-34	L51_S25_CI-B8 domain-containing protein. (189 aa)
	iars-2	Isoleucyl Amino-acyl tRNA Synthetase. (970 aa)
	rars-2	DALR_1 domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (512 aa)
	prx-10	Tryptophan--tRNA ligase, mitochondrial; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. (360 aa)
	C39B5.6	Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily. (506 aa)
	tufm-2	Mitochondrial elongation factor Tu homologue. (439 aa)
	F02A9.10-2	Ribosomal protein L44, mitochondrial; Component of the mitochondrial ribosome. May have a function in the assembly/stability of nascent mitochondrial polypeptides exiting the ribosome. (394 aa)
	mrps-21	Mitochondrial Ribosomal Protein, Small. (113 aa)
	gfm-1	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (750 aa)
	mrps-24	28S ribosomal protein S24, mitochondrial; Belongs to the universal ribosomal protein uS3 family. (164 aa)
	F46B6.6	Tr-type G domain-containing protein. (702 aa)
	tsfm-1	Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. (316 aa)
	mrpl-2	Ribosomal_L2_C domain-containing protein. (321 aa)
	mrps-16	Probable 28S ribosomal protein S16, mitochondrial; Belongs to the bacterial ribosomal protein bS16 family. (147 aa)
	F58G1.8	EFG_II domain-containing protein. (83 aa)
	K03B4.1	Uncharacterized protein. (388 aa)
	mrps-15	28S ribosomal protein S15, mitochondrial; Belongs to the universal ribosomal protein uS15 family. (330 aa)
	mrps-34	Mitochondrial Ribosomal Protein, Small. (228 aa)
	R02F2.9	RF_PROK_I domain-containing protein. (165 aa)
	mrps-6	Mitochondrial Ribosomal Protein, Small. (162 aa)
	mrps-12	Mitochondrial Ribosomal Protein, Small; Belongs to the universal ribosomal protein uS12 family. (157 aa)
	mrpl-16	Ribosomal_L16 domain-containing protein. (240 aa)
	mrpl-23	Probable 39S ribosomal protein L23, mitochondrial; Belongs to the universal ribosomal protein uL23 family. (159 aa)
	gars-1	Glycine--tRNA ligase; Catalyzes the ATP-dependent ligation of glycine to the 3'-end of its cognate tRNA, via the formation of an aminoacyl-adenylate intermediate (Gly-AMP). Also produces diadenosine tetraphosphate (Ap4A), a universal pleiotropic signaling molecule needed for cell regulation pathways, by direct condensation of 2 ATPs. Thereby, may play a special role in Ap4A homeostasis. Belongs to the class-II aminoacyl-tRNA synthetase family. (742 aa)
	hars-1	Histidine--tRNA ligase; Involved in protein synthesis. Catalyzes the specific attachment of an amino acid to its cognate tRNA in a 2 step reaction: the amino acid (AA) is first activated by ATP to form AA-AMP and then transferred to the acceptor end of the tRNA (Probable). Required for germ cell development. Belongs to the class-II aminoacyl-tRNA synthetase family. (524 aa)
	mrpl-51	39S ribosomal protein L51, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mL51 family. (199 aa)

Your Current Organism:

Caenorhabditis elegans

NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C24D10.6	F02A9.10-2	C24D10.6.1	F02A9.4.1	CHCH domain-containing protein.	Ribosomal protein L44, mitochondrial; Component of the mitochondrial ribosome. May have a function in the assembly/stability of nascent mitochondrial polypeptides exiting the ribosome.	0.885
C24D10.6	F46B6.6	C24D10.6.1	F46B6.6a.1	CHCH domain-containing protein.	Tr-type G domain-containing protein.	0.738
C24D10.6	F58G1.8	C24D10.6.1	F58G1.8.1	CHCH domain-containing protein.	EFG_II domain-containing protein.	0.464
C24D10.6	R02F2.9	C24D10.6.1	R02F2.9.1	CHCH domain-containing protein.	RF_PROK_I domain-containing protein.	0.908
C24D10.6	W03F8.3	C24D10.6.1	W03F8.3a.1	CHCH domain-containing protein.	Probable peptide chain release factor 1, mitochondrial; Mitochondrial peptide chain release factor that directs the termination of translation in response to the peptide chain termination codons UAA and UAG.	0.551
C24D10.6	Y67D2.4	C24D10.6.1	Y67D2.4a.1	CHCH domain-containing protein.	CP-type G domain-containing protein.	0.597
C24D10.6	gfm-1	C24D10.6.1	F29C12.4.2	CHCH domain-containing protein.	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	0.470
C24D10.6	let-630	C24D10.6.1	Y110A7A.19.1	CHCH domain-containing protein.	Uncharacterized protein.	0.977
C24D10.6	mrpl-16	C24D10.6.1	T04A8.11.1	CHCH domain-containing protein.	Ribosomal_L16 domain-containing protein.	0.909
C24D10.6	mrpl-2	C24D10.6.1	F56B3.8a.1	CHCH domain-containing protein.	Ribosomal_L2_C domain-containing protein.	0.763
C24D10.6	mrpl-23	C24D10.6.1	T08B2.8.1	CHCH domain-containing protein.	Probable 39S ribosomal protein L23, mitochondrial; Belongs to the universal ribosomal protein uL23 family.	0.917
C24D10.6	mrpl-34	C24D10.6.1	C25A1.13.1	CHCH domain-containing protein.	L51_S25_CI-B8 domain-containing protein.	0.931
C24D10.6	mrpl-47	C24D10.6.1	B0261.4a.1	CHCH domain-containing protein.	Mitochondrial Ribosomal Protein, Large.	0.946
C24D10.6	mrpl-51	C24D10.6.1	T12G3.5.2	CHCH domain-containing protein.	39S ribosomal protein L51, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mL51 family.	0.942
C24D10.6	mrps-11	C24D10.6.1	W04D2.5.1	CHCH domain-containing protein.	Mitochondrial Ribosomal Protein, Small.	0.974
C24D10.6	mrps-12	C24D10.6.1	T03D8.2.1	CHCH domain-containing protein.	Mitochondrial Ribosomal Protein, Small; Belongs to the universal ribosomal protein uS12 family.	0.901
C24D10.6	mrps-15	C24D10.6.1	K07A12.7.1	CHCH domain-containing protein.	28S ribosomal protein S15, mitochondrial; Belongs to the universal ribosomal protein uS15 family.	0.980
C24D10.6	mrps-16	C24D10.6.1	F56D1.3.1	CHCH domain-containing protein.	Probable 28S ribosomal protein S16, mitochondrial; Belongs to the bacterial ribosomal protein bS16 family.	0.991
C24D10.6	mrps-17	C24D10.6.1	C05D11.10.1	CHCH domain-containing protein.	28S ribosomal protein S17, mitochondrial; Belongs to the universal ribosomal protein uS17 family.	0.984
C24D10.6	mrps-18A	C24D10.6.1	ZC262.8.1	CHCH domain-containing protein.	Mitochondrial Ribosomal Protein, Small.	0.926