Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| T26A5.8 | Y43F8C.6 | T26A5.8.1 | Y43F8C.6b.1 | CBFD_NFYB_HMF domain-containing protein. | Uncharacterized protein. | 0.540 |
| T26A5.8 | athp-2 | T26A5.8.1 | H20J04.2.1 | CBFD_NFYB_HMF domain-containing protein. | AT Hook plus PHD finger transcription factor. | 0.974 |
| T26A5.8 | nurf-1 | T26A5.8.1 | F26H11.2a.1 | CBFD_NFYB_HMF domain-containing protein. | Nucleosome-remodeling factor subunit NURF301-like; Histone-binding component of a NURF-like (nucleosome remodeling factor-like) complex, which would catalyze ATP-dependent nucleosome sliding and facilitate transcription of chromatin (Probable). Involved in vulval cell fates. Belongs to the BPTF family. | 0.585 |
| Y43F8C.6 | T26A5.8 | Y43F8C.6b.1 | T26A5.8.1 | Uncharacterized protein. | CBFD_NFYB_HMF domain-containing protein. | 0.540 |
| Y43F8C.6 | athp-2 | Y43F8C.6b.1 | H20J04.2.1 | Uncharacterized protein. | AT Hook plus PHD finger transcription factor. | 0.603 |
| Y43F8C.6 | nurf-1 | Y43F8C.6b.1 | F26H11.2a.1 | Uncharacterized protein. | Nucleosome-remodeling factor subunit NURF301-like; Histone-binding component of a NURF-like (nucleosome remodeling factor-like) complex, which would catalyze ATP-dependent nucleosome sliding and facilitate transcription of chromatin (Probable). Involved in vulval cell fates. Belongs to the BPTF family. | 0.715 |
| arp-6 | ekl-4 | C08B11.6.1 | Y105E8A.17b.1 | Actin-like protein C08B11.6; Belongs to the actin family. ARP6 subfamily. | Uncharacterized protein. | 0.966 |
| arp-6 | let-418 | C08B11.6.1 | F26F12.7.1 | Actin-like protein C08B11.6; Belongs to the actin family. ARP6 subfamily. | Protein let-418; Part of a NuRD (Nucleosome Remodeling and Deacetylase) complex which is implicated in the synMuv B pathway that negatively regulates specification of vulval cell fate. This negative regulation is thought to be mediated via interaction with the promoter of lin-39, a key regulator in vulva development, and is dependent on the presence lin-1. Contributes to negative regulation of lag-2 which is expressed in the gut during larval development. Has a broad role in development. In association with akir-1, plays a role in regulating the transcription of antimicrobial peptide g [...] | 0.484 |
| arp-6 | ruvb-1 | C08B11.6.1 | C27H6.2.1 | Actin-like protein C08B11.6; Belongs to the actin family. ARP6 subfamily. | RuvB-like 1; Possesses single-stranded DNA-stimulated ATPase and ATP dependent DNA helicase (3' to 5') activity suggesting a role in nuclear processes such as recombination and transcription (By similarity). May participate in several chromatin remodeling complexes that mediate the ATP-dependent exchange of histones and remodel chromatin by shifting nucleosomes (By similarity). Involvement in these complexes is likely required for transcriptional activation of selected genes and DNA repair in response to DNA damage (By similarity). Involved in the Ce- Tor signaling pathway whereby it i [...] | 0.993 |
| arp-6 | ruvb-2 | C08B11.6.1 | T22D1.10.1 | Actin-like protein C08B11.6; Belongs to the actin family. ARP6 subfamily. | RuvB-like 2; Possesses single-stranded DNA-stimulated ATPase and ATP- dependent DNA helicase (5' to 3') activity suggesting a role in nuclear processes such as recombination and transcription (By similarity). May participate in several chromatin remodeling complexes that mediate the ATP-dependent exchange of histones and remodel chromatin by shifting nucleosomes (By similarity). Involvement in these complexes is likely required for transcriptional activation of selected genes and DNA repair in response to DNA damage (By similarity). Has a role in gonadal development. Involved in the en [...] | 0.981 |
| arp-6 | ssl-1 | C08B11.6.1 | Y111B2A.22a.1 | Actin-like protein C08B11.6; Belongs to the actin family. ARP6 subfamily. | Helicase ssl-1; Probable catalytic component of a chromatin-remodeling complex which mediates the ATP-dependent exchange of histone H2A variant H2AV/htz-1 for H2A, leading to transcriptional regulation of selected genes by chromatin remodeling. Involved in foregut development, and may be involved in vulval development. Belongs to the SNF2/RAD54 helicase family. SWR1 subfamily. | 0.992 |
| arp-6 | swsn-6 | C08B11.6.1 | ZK616.4.2 | Actin-like protein C08B11.6; Belongs to the actin family. ARP6 subfamily. | SWI/SNF nucleosome remodeling complex component; Belongs to the actin family. | 0.417 |
| arp-6 | zhit-1 | C08B11.6.1 | CD4.7b.1 | Actin-like protein C08B11.6; Belongs to the actin family. ARP6 subfamily. | HIT-type domain-containing protein. | 0.998 |
| athp-2 | T26A5.8 | H20J04.2.1 | T26A5.8.1 | AT Hook plus PHD finger transcription factor. | CBFD_NFYB_HMF domain-containing protein. | 0.974 |
| athp-2 | Y43F8C.6 | H20J04.2.1 | Y43F8C.6b.1 | AT Hook plus PHD finger transcription factor. | Uncharacterized protein. | 0.603 |
| athp-2 | lin-53 | H20J04.2.1 | K07A1.12.1 | AT Hook plus PHD finger transcription factor. | Probable histone-binding protein lin-53; Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA (By similarity). Required for hcp-3 and his-1 stabilization, localization of hcp-3 to centromeres and for proper chromosome segregation. Synthetic multivulva class B (synMuvB) protein. SynMuvB proteins are required to repress the induction of vulval development by Ras signaling and probably act by forming the multiprotein DRM complex that repres [...] | 0.478 |
| athp-2 | nurf-1 | H20J04.2.1 | F26H11.2a.1 | AT Hook plus PHD finger transcription factor. | Nucleosome-remodeling factor subunit NURF301-like; Histone-binding component of a NURF-like (nucleosome remodeling factor-like) complex, which would catalyze ATP-dependent nucleosome sliding and facilitate transcription of chromatin (Probable). Involved in vulval cell fates. Belongs to the BPTF family. | 0.759 |
| dcp-66 | egl-27 | C26C6.5b.1 | C04A2.3a.1 | Deacetylase Complex Protein. | Egg-laying defective protein 27; Transcription factor which promotes stress survival and delays aging. Required for cell cycle progression and development of the mesodermal and endodermal embryonic lineages. Required for normal T-cell polarity, for correct migration of QL neuroblast descendants and other cells, for embryonic patterning and for the embryonic expression of hlh-8. Also required for the transdifferentiation of the Y rectal epithelial cell to the PDA motor neuron during larval development. | 0.752 |
| dcp-66 | hda-1 | C26C6.5b.1 | C53A5.3.1 | Deacetylase Complex Protein. | Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression. Plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. Involved in the endoderm determination possibly by repressing end-1 expression. Also involved in vulval development, possibly by repressing lag-2 expression. In association with akir-1, plays a role in regula [...] | 0.867 |
| dcp-66 | let-418 | C26C6.5b.1 | F26F12.7.1 | Deacetylase Complex Protein. | Protein let-418; Part of a NuRD (Nucleosome Remodeling and Deacetylase) complex which is implicated in the synMuv B pathway that negatively regulates specification of vulval cell fate. This negative regulation is thought to be mediated via interaction with the promoter of lin-39, a key regulator in vulva development, and is dependent on the presence lin-1. Contributes to negative regulation of lag-2 which is expressed in the gut during larval development. Has a broad role in development. In association with akir-1, plays a role in regulating the transcription of antimicrobial peptide g [...] | 0.981 |
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