Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EEED8.10 | cul-1 | EEED8.10a.1 | D2045.6.1 | Putative RNA-binding protein EEED8.10. | Cullin-1; Probable core component of multiple cullin-RING-based SCF (SKP1-CUL1-F-box) E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. As a scaffold protein may contribute to catalysis through positioning of the substrate and the ubiquitin-conjugating enzyme. Required for developmentally programmed transitions from the G1 phase of the cell cycle to the G0 phase or the apoptotic pathway. | 0.666 |
| EEED8.10 | cul-2 | EEED8.10a.1 | ZK520.4c.1 | Putative RNA-binding protein EEED8.10. | Cullin-2; Core component of multiple cullin-RING-based CBC (Cul2- ElonginB-ElonginC) E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. As a scaffold protein may contribute to catalysis through positioning of the substrate and the ubiquitin-conjugating enzyme. The functional specificity of the CBC complex depends on the variable substrate recognition component (By similarity). May function in ubiquitin-mediated degradation of CKIs to target cki-1 for degradation. CBC(zif-1) may ensure germline precursor cell [...] | 0.402 |
| EEED8.10 | cul-5 | EEED8.10a.1 | ZK856.1.1 | Putative RNA-binding protein EEED8.10. | Cullin-5; Probable core component of cullin-based SCF-like E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. In association with rbx-2 seems to be involved in meiotic cell cycle progression in the germline. Required for phosphorylation of the MAP kinase MPK-1 in the germline. | 0.425 |
| EEED8.10 | cul-6 | EEED8.10a.1 | K08E7.7a.1 | Putative RNA-binding protein EEED8.10. | Cullin-6; Probable core component of cullin-based SCF-like E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. | 0.450 |
| EEED8.10 | mfb-1 | EEED8.10a.1 | DY3.6.1 | Putative RNA-binding protein EEED8.10. | F-box domain-containing protein. | 0.416 |
| EEED8.10 | skpt-1 | EEED8.10a.1 | F48E8.7a.1 | Putative RNA-binding protein EEED8.10. | F-box domain-containing protein. | 0.456 |
| EEED8.10 | skr-1 | EEED8.10a.1 | F46A9.5.4 | Putative RNA-binding protein EEED8.10. | Skp1-related protein; Probable essential component of SCF (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complexes, which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. Regulates cell proliferation during embryonic and larval development. Involved in synapse elimination in early synapse development. May negatively regulate the apoptotic activity of cep-1 in response to genotoxic stress. Plays a role in sex determination. | 0.557 |
| K02A6.3 | cul-1 | K02A6.3a.1 | D2045.6.1 | F-box domain-containing protein. | Cullin-1; Probable core component of multiple cullin-RING-based SCF (SKP1-CUL1-F-box) E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. As a scaffold protein may contribute to catalysis through positioning of the substrate and the ubiquitin-conjugating enzyme. Required for developmentally programmed transitions from the G1 phase of the cell cycle to the G0 phase or the apoptotic pathway. | 0.450 |
| K02A6.3 | cul-6 | K02A6.3a.1 | K08E7.7a.1 | F-box domain-containing protein. | Cullin-6; Probable core component of cullin-based SCF-like E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. | 0.450 |
| T28B4.1 | cul-1 | T28B4.1c.1 | D2045.6.1 | F-box domain-containing protein. | Cullin-1; Probable core component of multiple cullin-RING-based SCF (SKP1-CUL1-F-box) E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. As a scaffold protein may contribute to catalysis through positioning of the substrate and the ubiquitin-conjugating enzyme. Required for developmentally programmed transitions from the G1 phase of the cell cycle to the G0 phase or the apoptotic pathway. | 0.817 |
| T28B4.1 | cul-6 | T28B4.1c.1 | K08E7.7a.1 | F-box domain-containing protein. | Cullin-6; Probable core component of cullin-based SCF-like E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. | 0.817 |
| T28B4.1 | madf-11 | T28B4.1c.1 | C05D2.6a.2 | F-box domain-containing protein. | MADF domain-containing protein. | 0.526 |
| T28B4.1 | skpt-1 | T28B4.1c.1 | F48E8.7a.1 | F-box domain-containing protein. | F-box domain-containing protein. | 0.410 |
| T28B4.1 | skr-1 | T28B4.1c.1 | F46A9.5.4 | F-box domain-containing protein. | Skp1-related protein; Probable essential component of SCF (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complexes, which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. Regulates cell proliferation during embryonic and larval development. Involved in synapse elimination in early synapse development. May negatively regulate the apoptotic activity of cep-1 in response to genotoxic stress. Plays a role in sex determination. | 0.526 |
| T28B4.1 | skr-10 | T28B4.1c.1 | Y105C5B.13.1 | F-box domain-containing protein. | SKp1 Related (Ubiquitin ligase complex component); Belongs to the SKP1 family. | 0.526 |
| T28B4.1 | skr-12 | T28B4.1c.1 | C52D10.6.1 | F-box domain-containing protein. | SKp1 Related (Ubiquitin ligase complex component); Belongs to the SKP1 family. | 0.526 |
| T28B4.1 | skr-13 | T28B4.1c.1 | C52D10.8.1 | F-box domain-containing protein. | SKp1 Related (Ubiquitin ligase complex component); Belongs to the SKP1 family. | 0.526 |
| T28B4.1 | skr-14 | T28B4.1c.1 | Y47D7A.8.3 | F-box domain-containing protein. | SKp1 Related (Ubiquitin ligase complex component); Belongs to the SKP1 family. | 0.526 |
| T28B4.1 | skr-15 | T28B4.1c.1 | F54D10.1.1 | F-box domain-containing protein. | SKp1 Related (Ubiquitin ligase complex component); Belongs to the SKP1 family. | 0.526 |
| T28B4.1 | skr-16 | T28B4.1c.1 | C42D4.6.1 | F-box domain-containing protein. | SKp1 Related (Ubiquitin ligase complex component); Belongs to the SKP1 family. | 0.526 |
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