STRINGSTRING
pat-3 pat-3 ZK1321.4 ZK1321.4 C25F9.2 C25F9.2 lim-9 lim-9 clik-3 clik-3 chn-1 chn-1 alp-1 alp-1 atn-1 atn-1 chp-1 chp-1 zig-9 zig-9
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pat-3Integrin beta pat-3; Integrin alpha ina-1/beta pat-3 is a receptor for laminin. Integrin alpha pat-2/beta pat-3 recognizes the sequence R-G-D in its ligands (Probable). Plays a role in cell migration, morphogenesis and probably in cell-cell interactions. During gonad morphogenesis, involved in distal tip cell (DTC)-mediated guidance of gonad elongation, in maintaining their sharp tapering morphology and in their migration. Component of an integrin containing attachment complex, which is required for muscle development and maintenance. Involved in the assembly of dense bodies and M line [...] (809 aa)
ZK1321.4PDZ domain-containing protein. (429 aa)
C25F9.2DNA_pol_B_2 domain-containing protein. (1523 aa)
lim-9LIM domain family. (793 aa)
clik-3CaLponIn-liKe proteins. (202 aa)
chn-1C-term of Hsp70-iNteracting protein (CHIP family). (266 aa)
alp-1ALP/Enigma encoding. (1424 aa)
atn-1AcTiniN. (920 aa)
chp-1CHORD containing protein. (321 aa)
zig-9Ig-like domain-containing protein. (283 aa)
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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