STRINGSTRING
best-11 best-11 best-26 best-26 best-25 best-25 best-23 best-23 eat-4 eat-4 shk-1 shk-1 tax-4 tax-4 best-22 best-22 ZC477.3 ZC477.3 cng-2 cng-2 best-21 best-21 micu-1 micu-1 eat-2 eat-2 kvs-4 kvs-4 best-20 best-20 Y12A6A.1 Y12A6A.1 exc-4 exc-4 ccb-2 ccb-2 zipt-7.1 zipt-7.1 ccb-1 ccb-1 tag-180 tag-180 best-19 best-19 best-18 best-18 lgc-50 lgc-50 T19C3.3 T19C3.3 best-17 best-17 T19B10.2 T19B10.2 unc-2 unc-2 shw-3 shw-3 best-16 best-16 best-15 best-15 egl-36 egl-36 trp-2 trp-2 R02D5.3 R02D5.3 irk-2 irk-2 unc-68 unc-68 mod-1 mod-1 sol-2 sol-2 irk-3 irk-3 neto-1 neto-1 mcu-1 mcu-1 zipt-7.2 zipt-7.2 kvs-3 kvs-3 csq-1 csq-1 cng-3 cng-3 tax-2 tax-2 itr-1 itr-1 best-14 best-14 best-13 best-13 glc-2 glc-2 unc-80 unc-80 emre-1 emre-1 cng-1 cng-1 best-12 best-12 exp-2 exp-2 stg-2 stg-2 molo-1 molo-1 nmr-1 nmr-1 C56A3.6 C56A3.6 cca-1 cca-1 kvs-1 kvs-1 unc-36 unc-36 best-10 best-10 egl-19 egl-19 best-9 best-9 acr-9 acr-9 best-8 best-8 C32C4.1 C32C4.1 mps-1 mps-1 best-7 best-7 glc-4 glc-4 che-6 che-6 stg-1 stg-1 sol-1 sol-1 orai-1 orai-1 C09B9.85 C09B9.85 best-6 best-6 best-5 best-5 glr-1 glr-1 best-4 best-4 best-3 best-3 best-1 best-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
best-11Bestrophin homolog; Forms chloride channels; Belongs to the bestrophin family. (444 aa)
best-26Bestrophin homolog 26; Forms chloride channels. (411 aa)
best-25Bestrophin homolog 25; Forms chloride channels. (602 aa)
best-23Bestrophin homolog; Forms chloride channels; Belongs to the bestrophin family. (405 aa)
eat-4Probable vesicular glutamate transporter eat-4; Required for glutamatergic synaptic transmission. In AWB and AWC sensory neurons, required for the detection of preferred food sources, probably via glutamatergic neurotransmission from sensory neurons. Negatively regulates the turning step of male mating behavior. (576 aa)
shk-1Potassium voltage-gated channel protein shk-1; Mediates the voltage-dependent potassium ion permeability of excitable membranes. Has an important role in repolarization and in regulating the pattern of action potential firing. Isoform a expresses currents in a more depolarized voltage range than isoform d. (536 aa)
tax-4Cyclic nucleotide-gated cation channel; Required for normal thermosensation and chemosensation sensory behavior. Required, downstream of receptor- type guanylate cyclase gcy-9, for CO2-mediated responses in BAG neurons. Required, downstream of receptor-type guanylate cyclase gcy-14, for alkaline pH-mediated responses in ASE-left (ASEL) neurons. Involved in the development of ASJ sensory neuron axon during late larval stages and in the maintenance of normal axon morphology in the adult. Regulates dauer formation. Required for the calcium flux to the cytoplasm in the ASJ sensory neurons [...] (733 aa)
best-22Bestrophin homolog 22; Forms chloride channels. (510 aa)
ZC477.3Uncharacterized protein. (330 aa)
cng-2Cyclic nucleotide-binding domain-containing protein. (819 aa)
best-21Bestrophin homolog; Forms chloride channels; Belongs to the bestrophin family. (395 aa)
micu-1Calcium uptake protein 1 homolog, mitochondrial; Key regulator of mitochondrial calcium uniporter (MCU). (534 aa)
eat-2Neuronal acetylcholine receptor subunit eat-2; After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane (By similarity). Nicotinic acetylcholine receptor in the MC pharyngeal motor neuron involved in pharyngeal pumping. Has a role in the determination of life span possibly via calorific restriction which affects growth rate, although this is independent of metabolic activity. Plays a role in the defense against the accumulation of ingested live pathogenic [...] (474 aa)
kvs-4Probable voltage-gated potassium channel subunit kvs-4; Voltage-gated potassium channel that mediates transmembrane potassium transport in excitable membranes. (512 aa)
best-20Bestrophin homolog; Forms chloride channels; Belongs to the bestrophin family. (486 aa)
Y12A6A.1Uncharacterized protein. (209 aa)
exc-4Chloride intracellular channel exc-4; May insert into membranes and form chloride ion channels. Involved in the formation of the excretory canal. Required to prevent cystic lumenal expansions in the excretory cell. Not required for formation of the initial tube, but is required for regulating the size of the tube lumen as it grows. (290 aa)
ccb-2SH3 domain-containing protein. (396 aa)
zipt-7.1Zinc transporter zipt-7.1; Zinc transporter which regulates intracellular zinc levels. Required for spermatogenesis in both hermaphrodites and males where it resides in an inactive form in immature sperm, spermatids, but is likely activated in response to reduced spe-4 and spe-6 function. Upon activation, mediates the release of zinc from internal stores in spermatids into the cytoplasm. The resulting increase in cytoplasmic zinc levels promotes spermatid activation and subsequent differentiation into mature motile sperm that are capable of fertilization. (393 aa)
ccb-1GuKc domain-containing protein. (526 aa)
tag-180VWFA domain-containing protein. (1067 aa)
best-19Bestrophin homolog; Forms chloride channels; Belongs to the bestrophin family. (569 aa)
best-18Bestrophin homolog 18; Forms chloride channels. (456 aa)
lgc-50Ligand-gated ion channel 50. (491 aa)
T19C3.3Uncharacterized protein T19C3.3. (92 aa)
best-17Bestrophin homolog 17; Forms chloride channels. (501 aa)
T19B10.2Uncharacterized protein. (368 aa)
unc-2EF-hand domain-containing protein. (2171 aa)
shw-3BTB domain-containing protein; Belongs to the potassium channel family. (500 aa)
best-16Bestrophin homolog; Forms chloride channels; Belongs to the bestrophin family. (463 aa)
best-15Bestrophin homolog 15; Forms chloride channels. (525 aa)
egl-36Potassium voltage-gated channel protein egl-36; Voltage-dependent potassium channel involved in the excitation of muscles operating egg-laying and defecation. Belongs to the potassium channel family. C (Shaw) (TC 1.A.1.2) subfamily. Shaw sub-subfamily. (558 aa)
trp-2TRP (Transient receptor potential) channel family; Belongs to the transient receptor (TC 1.A.4) family. (886 aa)
R02D5.3Uncharacterized protein. (258 aa)
irk-2Inward Rectifying K (Potassium) channel family. (497 aa)
unc-68Uncharacterized protein. (5202 aa)
mod-1Serotonin-gated chloride channel; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (489 aa)
sol-2Suppressor Of Lurcher movement defect. (436 aa)
irk-3IRK_C domain-containing protein. (384 aa)
neto-1NETO (NEuropilin and TOlloid-like) homolog. (368 aa)
mcu-1Calcium uniporter protein, mitochondrial; Mitochondrial inner membrane calcium uniporter that mediates calcium uptake into mitochondria. Constitutes a pore- forming and calcium-conducting subunit (By similarity). Mitochondrial calcium homeostasis plays key roles in cellular physiology and regulates cell bioenergetics, cytoplasmic calcium signals and activation of cell death pathways (By similarity). Required for rapid mitochondrial calcium uptake and mitochondrial reactive oxygen species (mtROS) production after wounding. (333 aa)
zipt-7.2Zinc transporter zipt-7.2; Zinc transporter. (462 aa)
kvs-3Uncharacterized protein; Belongs to the potassium channel family. (451 aa)
csq-1Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle. (417 aa)
cng-3Cyclic nucleotide-binding domain-containing protein. (626 aa)
tax-2Cyclic nucleotide-binding domain-containing protein. (800 aa)
itr-1Inositol 1,4,5-trisphosphate receptor itr-1; Receptor for inositol 1,4,5-trisphosphate, a second messenger that regulates intracellular calcium homeostasis. Binds in vitro to both inositol 1,4,5-trisphosphate (1,4,5-InsP3) and inositol 2,4,5-trisphosphate (2,4,5-InsP3) with high affinity and does not discriminate between the phosphate at 1 or 2 position. Can also bind inositol 1,3,4,5-tetrakisphosphate (1,3,4,5-InsP4) and inositol 4,5-bisphosphate (4,5-InsP2), but with lower affinity. Acts as a timekeeper/rhythm generator via calcium signaling, affecting the defecation cycle and pharyn [...] (2892 aa)
best-14Bestrophin homolog 14. (405 aa)
best-13Bestrophin homolog 13; Forms chloride channels. (413 aa)
glc-2Glutamate-gated chloride channel subunit beta; Glutamate-gated chloride channel subunit; channel properties depend on the subunit composition. Glutamate binding triggers a rapidly reversible current in heteromeric channels formed by glc-1 and glc-2, while the anti-helmintic drug ivermectin and other avermectins trigger a permanently open channel configuration. Channels containing only glc- 2 are activated by glutamate, but not by ivermectin (in vitro). The heteromeric channel formed by glc-1 and glc-2 is also activated by ibotenate, and it is blocked by picrotoxin and flufenamic acid. (434 aa)
unc-80Protein unc-80; Probable component of the nca-1 sodium channel complex, a cation channel that regulates neuronal activity by transmitting depolarization signals to synapses. Regulates the transition from slow to rapid forms of locomotion. Required for localization of nca-1 along axons and in non-synaptic regions. Contributes to endocytosis defects in synaptojanin mutants. Involved in the control of anasthetic response to halothane. (3263 aa)
emre-1Essential MCU regulator, mitochondrial; Essential regulatory subunit of the mitochondrial calcium uniporter (mcu-1) channel, a protein that mediates calcium uptake into mitochondria; Belongs to the SMDT1/EMRE family. (90 aa)
cng-1Cyclic nucleotide-binding domain-containing protein. (661 aa)
best-12Bestrophin homolog 12; Forms chloride channels. (434 aa)
exp-2Uncharacterized protein; Belongs to the potassium channel family. (510 aa)
stg-2STarGazin (Mammalian calcium channel) homolog. (379 aa)
molo-1Uncharacterized protein. (298 aa)
nmr-1NMDA-type ionotropic glutamate receptor NMR-1; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (1025 aa)
C56A3.6Uncharacterized protein. (477 aa)
cca-1Voltage-dependent T-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. This channel gives rise to T-type calcium currents. T-type calcium channels belong to the "low-voltage activated (LVA)" group and are strongly blocked by nickel and mibefradil. A particularity of this type of channels is an opening at quite ne [...] (1885 aa)
kvs-1Uncharacterized protein; Belongs to the potassium channel family. (495 aa)
unc-36Voltage-dependent calcium channel unc-36; May act as an auxiliary subunit of the unc-2 voltage-gated calcium channel which appears to trigger calcium-activated signaling pathways that control the serotonin response. Inhibiting serotonin sensitivity of the vulval muscles results in egg laying defects. May act in both neurons and muscle cells to enhance motor activity as it is required for coordinated movement. Has a role in neural depolarization- induced calcium influx and pharyngeal pumping. Involved in restricting the expression of the putative olfactory receptor str-2 to only one of [...] (1249 aa)
best-10Bestrophin homolog; Forms chloride channels; Belongs to the bestrophin family. (423 aa)
egl-19Voltage-dependent L-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family. (1877 aa)
best-9Bestrophin homolog 9; Forms chloride channels. (399 aa)
acr-9AcetylCholine Receptor. (534 aa)
best-8Bestrophin homolog; Forms chloride channels; Belongs to the bestrophin family. (512 aa)
C32C4.1BTB domain-containing protein; Belongs to the potassium channel family. (575 aa)
mps-1MiRP K channel accessory Subunit. (257 aa)
best-7Bestrophin homolog; Forms chloride channels; Belongs to the bestrophin family. (540 aa)
glc-4Glutamate-gated ChLoride channel; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (500 aa)
che-6Cyclic nucleotide-binding domain-containing protein. (655 aa)
stg-1STarGazin (Mammalian calcium channel) homolog. (366 aa)
sol-1Suppressor of lurcher protein 1; Accessory protein required for glutamate-gated currents. May participate in the gating of non-NMDA (N-methyl-D-aspartate) ionotropic glutamate receptors such as glr-1. (594 aa)
orai-1Protein orai; Ca(2+) release-activated Ca(2+)-like (CRAC-like) channel subunit which mediates Ca(2+) influx and increase in Ca(2+)-selective current by synergy with the Ca(2+) sensor, stim-1. Required for Ca(2+) and IP3-dependent contractile activity of sheath cells and the spermatheca. Affects brood size and somatic cell function. Belongs to the Orai family. (297 aa)
C09B9.85Bestrophin homolog; Forms chloride channels; Belongs to the bestrophin family. (555 aa)
best-6Bestrophin-6. (382 aa)
best-5Bestrophin homolog 5; Forms chloride channels. (453 aa)
glr-1Glutamate receptor 1; Non-NMDA (N-methyl-D-aspartate) ionotropic glutamate receptor. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. The postsynaptic actions of glutamate are mediated by a variety of receptors that are named according to their selective agonists. May contribute to a sensory discrimination between mechanical and chemical stimuli. Plays a role in controlling movement in response to environmental cues such as food availability and mechanosensory stimulation such as the nose touch response. In AIB interneurons, promotes om [...] (962 aa)
best-4Bestrophin homolog; Forms chloride channels; Belongs to the bestrophin family. (558 aa)
best-3Bestrophin homolog; Forms chloride channels; Belongs to the bestrophin family. (612 aa)
best-1Bestrophin homolog 1; Forms chloride channels. (450 aa)
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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