STRINGSTRING
yop-1 yop-1 lnp-1 lnp-1 C06E1.1 C06E1.1 F33H1.4 F33H1.4 R05H5.5 R05H5.5 T19C3.4 T19C3.4 coa-4 coa-4 Y110A2AR.1 Y110A2AR.1 rbg-1 rbg-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
yop-1Receptor expression-enhancing protein. (183 aa)
lnp-1Endoplasmic reticulum junction formation protein lunapark-1; Plays a role in tubular endoplasmic reticulum network formation and maintenance (By similarity). May be involved in central nervous system development. Has a presynaptic role in neurotransmission. Likely to operate in synaptogenesis by regulating vesicular transport or localization. Required for correct localization of rab-3 and snb-1; Belongs to the lunapark family. (346 aa)
C06E1.1Uncharacterized protein C06E1.1. (161 aa)
F33H1.4Uncharacterized protein. (1378 aa)
R05H5.5ARV1 homolog. (236 aa)
T19C3.4Uncharacterized protein T19C3.4. (229 aa)
coa-4Cytochrome Oxidase Assembly subunits. (293 aa)
Y110A2AR.1Receptor expression-enhancing protein. (251 aa)
rbg-1Rab3 GTPase-activating protein catalytic subunit; Probable catalytic subunit of a GTPase activating protein that has specificity for Rab3 subfamily. Rab3 proteins are involved in regulated exocytosis of neurotransmitters and hormones. Specifically converts active Rab3-GTP to the inactive form Rab3-GDP (By similarity). (915 aa)
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
Server load: low (30%) [HD]