STRINGSTRING
lmd-5 lmd-5 cht-1 cht-1 lmd-4 lmd-4 cht-2 cht-2 cht-4 cht-4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lmd-5LysM Domain (Peptidoglycan binding) protein. (1518 aa)
cht-1Probable endochitinase. (617 aa)
lmd-4LysM Domain (Peptidoglycan binding) protein. (2011 aa)
cht-2CHiTinase; Belongs to the glycosyl hydrolase 18 family. (626 aa)
cht-4Glyco_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family. (360 aa)
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
Server load: medium (70%) [HD]