STRINGSTRING
wrt-8 wrt-8 wrt-4 wrt-4 wrt-6 wrt-6 wrt-1 wrt-1 wrt-7 wrt-7 hog-1 hog-1 qua-1 qua-1 grd-1 grd-1 grd-11 grd-11 grd-2 grd-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
wrt-8Warthog protein 8 C-product; Intercellular signal essential for a variety of patterning events during development. (550 aa)
wrt-4Warthog protein 4 C-product; Intercellular signal essential for a variety of patterning events during development. (557 aa)
wrt-6Warthog protein 6 C-product; Intercellular signal essential for a variety of patterning events during development; Belongs to the hedgehog family. (593 aa)
wrt-1Warthog protein 1 C-product; Intercellular signal essential for a variety of patterning events during development. (484 aa)
wrt-7WaRThog (Hedgehog-like family). (481 aa)
hog-1HOG only (Hedgehog Hog domain alone). (245 aa)
qua-1Protein qua-1; Required for cuticle shedding and normal alae morphology and localization, and subsequently larval development. (1169 aa)
grd-1GRounDhog (Hedgehog-like family). (1160 aa)
grd-11GRounDhog (Hedgehog-like family). (977 aa)
grd-2GRounDhog (Hedgehog-like family). (946 aa)
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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