Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| C53B4.4 | R11G1.6 | C53B4.4b.1 | R11G1.6b.1 | Uncharacterized protein. | Uncharacterized protein. | 0.660 |
| F59A6.5 | cyk-4 | F59A6.5.1 | K08E3.6.2 | Uncharacterized protein. | CYtoKinesis defect. | 0.572 |
| R11G1.6 | C53B4.4 | R11G1.6b.1 | C53B4.4b.1 | Uncharacterized protein. | Uncharacterized protein. | 0.660 |
| W02B8.2 | cyk-4 | W02B8.2.1 | K08E3.6.2 | Uncharacterized protein. | CYtoKinesis defect. | 0.438 |
| chin-1 | cyk-4 | BE0003N10.2.1 | K08E3.6.2 | CHImaeriN (Rac-GTPase-activating protein) homolog. | CYtoKinesis defect. | 0.473 |
| chin-1 | hum-7 | BE0003N10.2.1 | F56A6.2a.1 | CHImaeriN (Rac-GTPase-activating protein) homolog. | Heavy chain, Unconventional Myosin; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.416 |
| chin-1 | pkc-3 | BE0003N10.2.1 | F09E5.1.1 | CHImaeriN (Rac-GTPase-activating protein) homolog. | Protein kinase C-like 3; Required for the normal progression of embryogenesis and viability of the organism. Plays an indispensable role in establishing embryonic polarity and in recruiting and maintaining par-6 to the periphery, through interaction with par-3. Required for epithelial cell polarity in the distal spermatheca. Phosphorylates serine residues of num-1. Required for the expression of antimicrobial peptide nlp-29 in response in response to fungal infection or physical injury. | 0.816 |
| chin-1 | rhgf-1 | BE0003N10.2.1 | F13E6.6.1 | CHImaeriN (Rac-GTPase-activating protein) homolog. | RHo Guanine nucleotide exchange Factor. | 0.472 |
| chin-1 | spv-1 | BE0003N10.2.1 | ZK669.1a.1 | CHImaeriN (Rac-GTPase-activating protein) homolog. | Spermathecal Physiology Variant. | 0.449 |
| cyk-4 | F59A6.5 | K08E3.6.2 | F59A6.5.1 | CYtoKinesis defect. | Uncharacterized protein. | 0.572 |
| cyk-4 | W02B8.2 | K08E3.6.2 | W02B8.2.1 | CYtoKinesis defect. | Uncharacterized protein. | 0.438 |
| cyk-4 | chin-1 | K08E3.6.2 | BE0003N10.2.1 | CYtoKinesis defect. | CHImaeriN (Rac-GTPase-activating protein) homolog. | 0.473 |
| cyk-4 | hum-7 | K08E3.6.2 | F56A6.2a.1 | CYtoKinesis defect. | Heavy chain, Unconventional Myosin; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.542 |
| cyk-4 | let-502 | K08E3.6.2 | C10H11.9.1 | CYtoKinesis defect. | Rho-associated protein kinase let-502; Negatively regulates mel-11 to relieve the inhibition of mlc- 4, allowing contraction of the circumferentially oriented microfilaments in epidermal cells and thereby regulating myosin II contractility during spermathecal contraction, cleavage furrow contraction in early embryos, and embryonic elongation and morphogenesis. Required for P-cell migration. May also play a role in oocyte cellularization. | 0.446 |
| cyk-4 | spv-1 | K08E3.6.2 | ZK669.1a.1 | CYtoKinesis defect. | Spermathecal Physiology Variant. | 0.448 |
| dgk-1 | unc-13 | C09E10.2b.1 | ZK524.2d.1 | Diacylglycerol kinase. | Phorbol ester/diacylglycerol-binding protein unc-13; May form part of a signal transduction pathway, transducing the signal from diacylglycerol to effector functions. One such function could be the release of neurotransmitter from neurons. Probably by regulating neuronal transmission downstream of lin-3 and receptor lin-23 and phospholipase plc-3 and upstream of innexin unc-7 and egl-4/PKG in ALA neurons, involved in the decrease in pharyngeal pumping during the quiescent state that precedes each larval molt. | 0.742 |
| dgk-2 | dgk-3 | F46H6.2a.1 | F54G8.2.1 | Diacylglycerol kinase. | Probable diacylglycerol kinase 3; Involved in AFD-neuron mediated thermotaxis. Regulates behavior to environmental temperature. Thought to have a role in olfactory adaptation by affecting diacylglycerol levels. Belongs to the eukaryotic diacylglycerol kinase family. | 0.921 |
| dgk-2 | dgk-4 | F46H6.2a.1 | F42A9.1a.1 | Diacylglycerol kinase. | Diacylglycerol kinase. | 0.913 |
| dgk-2 | dgk-5 | F46H6.2a.1 | K06A1.6e.1 | Diacylglycerol kinase. | Putative diacylglycerol kinase K06A1.6. | 0.922 |
| dgk-2 | pkc-2 | F46H6.2a.1 | E01H11.1c.1 | Diacylglycerol kinase. | Protein kinase C-like 2; PKC is activated by diacylglycerol which in turn phosphorylates a range of cellular proteins. PKC also serves as the receptor for phorbol esters, a class of tumor promoters; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. | 0.406 |
page 1 of 4