STRINGSTRING
asns-2 asns-2 lars-2 lars-2 mttu-1 mttu-1 qns-1 qns-1 iars-2 iars-2 rars-2 rars-2 prx-10 prx-10 pcyt-2.2 pcyt-2.2 E01A2.5 E01A2.5 pcyt-1 pcyt-1 F23C8.5 F23C8.5 asns-1 asns-1 rars-1 rars-1 nmat-2 nmat-2 F27D4.1 F27D4.1 tut-1 tut-1 tut-2 tut-2 mars-1 mars-1 yars-2 yars-2 gmps-1 gmps-1 M18.3 M18.3 iars-1 iars-1 flad-1 flad-1 lars-1 lars-1 ears-2 ears-2 pps-1 pps-1 nmat-1 nmat-1 yars-1 yars-1 Y105E8A.20 Y105E8A.20 Y18H1A.11 Y18H1A.11 cars-1 cars-1 pcyt-2.1 pcyt-2.1 qars-1 qars-1 Y65B4A.8 Y65B4A.8 Y71H2B.5 Y71H2B.5 wars-1 wars-1 glp-4 glp-4 ears-1 ears-1 vars-1 vars-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
asns-2Glutamine amidotransferase type-2 domain-containing protein. (567 aa)
lars-2Anticodon_1 domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (859 aa)
mttu-1Probable mitochondrial tRNA-specific 2-thiouridylase 1; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of mitochondrial tRNA(Lys), tRNA(Glu) and tRNA(Gln). Required for the formation of 5-taurinomethyl-2-thiouridine (tm5s2U) of mitochondrial tRNA(Lys), tRNA(Glu), and tRNA(Gln) at the wobble position. ATP is required to activate the C2 atom of the wobble base. Belongs to the MnmA/TRMU family. (375 aa)
qns-1Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family. (703 aa)
iars-2Isoleucyl Amino-acyl tRNA Synthetase. (970 aa)
rars-2DALR_1 domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (512 aa)
prx-10Tryptophan--tRNA ligase, mitochondrial; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. (360 aa)
pcyt-2.2CTP_transf_like domain-containing protein. (361 aa)
E01A2.5Diphthine--ammonia ligase; Amidase that catalyzes the last step of diphthamide biosynthesis using ammonium and ATP. (249 aa)
pcyt-1Putative choline-phosphate cytidylyltransferase; Belongs to the cytidylyltransferase family. (362 aa)
F23C8.5ETF domain-containing protein. (255 aa)
asns-1Glutamine amidotransferase type-2 domain-containing protein. (551 aa)
rars-1Probable arginine--tRNA ligase, cytoplasmic; Forms part of a macromolecular complex that catalyzes the attachment of specific amino acids to cognate tRNAs during protein synthesis. (713 aa)
nmat-2Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 2; Catalyzes the formation of NAD(+) from nicotinamide mononucleotide (NMN) and ATP. Can also use the deamidated form; nicotinic acid mononucleotide (NaMN) as substrate. Belongs to the eukaryotic NMN adenylyltransferase family. (223 aa)
F27D4.1Probable electron transfer flavoprotein subunit alpha, mitochondrial; The electron transfer flavoprotein serves as a specific electron acceptor for several dehydrogenases, including five acyl-CoA dehydrogenases, glutaryl-CoA and sarcosine dehydrogenase. It transfers the electrons to the main mitochondrial respiratory chain via ETF- ubiquinone oxidoreductase (ETF dehydrogenase) (By similarity). (332 aa)
tut-1Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position; Belongs to the TtcA family. CTU1/NCS6/ATPBD3 subfamily. (373 aa)
tut-2Cytoplasmic tRNA 2-thiolation protein 2; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). May act by forming a heterodimer with tut-1/ctu-1 that ligates sulfur from thiocarboxylated urm-1 onto the uridine of tRNAs at wobble position. (349 aa)
mars-1Methionine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family. (917 aa)
yars-2Tyrosine--tRNA ligase. (447 aa)
gmps-1Probable GMP synthase [glutamine-hydrolyzing]. (745 aa)
M18.3Asparagine synthetase domain-containing protein. (475 aa)
iars-1Isoleucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family. (1141 aa)
flad-1Molybdenum cofactor biosynthesis protein-like region; Catalyzes the adenylation of flavin mononucleotide (FMN) to form flavin adenine dinucleotide (FAD) coenzyme; In the N-terminal section; belongs to the MoaB/Mog family. (519 aa)
lars-1Leucine--tRNA ligase; Involved in protein synthesis. Catalyzes the specific attachment of an amino acid to its cognate tRNA in a 2 step reaction: the amino acid (AA) is first activated by ATP to form AA-AMP and then transferred to the acceptor end of the tRNA. (1186 aa)
ears-2tRNA-synt_1c domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (481 aa)
pps-13'-Phosphoadenosine 5'-Phosphosulfate Synthetase. (654 aa)
nmat-1Nicotinamide-nucleotide adenylyltransferase. (220 aa)
yars-1Tyrosine--tRNA ligase. (722 aa)
Y105E8A.20tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (524 aa)
Y18H1A.11CTP_transf_like domain-containing protein. (272 aa)
cars-1tRNA-synt_1e domain-containing protein. (909 aa)
pcyt-2.1CTP_transf_like domain-containing protein. (391 aa)
qars-1Probable glutamine--tRNA ligase. (786 aa)
Y65B4A.8CTP_transf_like domain-containing protein. (461 aa)
Y71H2B.5Uncharacterized protein. (957 aa)
wars-1Tryptophanyl(W) Amino-acyl tRNA Synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (417 aa)
glp-4Valine--tRNA ligase. (1050 aa)
ears-1Glutamyl(E) Amino-acyl tRNA Synthetase. (1149 aa)
vars-1Valyl Amino-acyl tRNA Synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (978 aa)
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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