21 items (Caenorhabditis elegans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	acdh-10	Probable medium-chain specific acyl-CoA dehydrogenase 10, mitochondrial; This enzyme is specific for acyl chain lengths of 4 to 16. Belongs to the acyl-CoA dehydrogenase family. (417 aa)
	ivd-1	Isovaleryl-CoA dehydrogenase. (419 aa)
	acdh-6	Probable acyl-CoA dehydrogenase 6; Belongs to the acyl-CoA dehydrogenase family. (408 aa)
	acdh-2	Acyl CoA DeHydrogenase. (386 aa)
	acdh-13	Acyl CoA DeHydrogenase. (617 aa)
	acdh-5	Acyl CoA DeHydrogenase. (442 aa)
	acox-1.5	Probable peroxisomal acyl-coenzyme A oxidase 1.5; Catalyzes the desaturation of acyl-CoAs to 2-trans-enoyl- CoAs. (659 aa)
	acdh-1	Acyl CoA DeHydrogenase. (427 aa)
	acdh-12	Acyl CoA DeHydrogenase. (613 aa)
	acox-1.1	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (674 aa)
	acox-1.2	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (661 aa)
	acox-1.3	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (660 aa)
	acox-1.4	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (662 aa)
	acdh-9	Acyl CoA DeHydrogenase. (409 aa)
	F54D5.7	Probable glutaryl-CoA dehydrogenase, mitochondrial. (409 aa)
	acox-1.6	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (667 aa)
	acdh-8	Acyl CoA DeHydrogenase. (412 aa)
	acdh-3	Acyl CoA DeHydrogenase. (419 aa)
	acds-10	ACaD (ACAD, acyl-CoA Dehydrogenase) Sequence homolog. (985 aa)
	acdh-4	Acyl CoA DeHydrogenase. (385 aa)
	acdh-7	Acyl CoA DeHydrogenase. (412 aa)

Your Current Organism:

Caenorhabditis elegans

NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F54D5.7	acdh-1	F54D5.7.2	C55B7.4a.1	Probable glutaryl-CoA dehydrogenase, mitochondrial.	Acyl CoA DeHydrogenase.	0.912
F54D5.7	acdh-10	F54D5.7.2	T08G2.3.2	Probable glutaryl-CoA dehydrogenase, mitochondrial.	Probable medium-chain specific acyl-CoA dehydrogenase 10, mitochondrial; This enzyme is specific for acyl chain lengths of 4 to 16. Belongs to the acyl-CoA dehydrogenase family.	0.920
F54D5.7	acdh-13	F54D5.7.2	C28C12.9.2	Probable glutaryl-CoA dehydrogenase, mitochondrial.	Acyl CoA DeHydrogenase.	0.461
F54D5.7	acdh-3	F54D5.7.2	K06A5.6.2	Probable glutaryl-CoA dehydrogenase, mitochondrial.	Acyl CoA DeHydrogenase.	0.917
F54D5.7	acdh-4	F54D5.7.2	T10E9.9b.1	Probable glutaryl-CoA dehydrogenase, mitochondrial.	Acyl CoA DeHydrogenase.	0.916
F54D5.7	acdh-7	F54D5.7.2	T25G12.5.1	Probable glutaryl-CoA dehydrogenase, mitochondrial.	Acyl CoA DeHydrogenase.	0.920
F54D5.7	acdh-8	F54D5.7.2	K05F1.3.1	Probable glutaryl-CoA dehydrogenase, mitochondrial.	Acyl CoA DeHydrogenase.	0.920
F54D5.7	acds-10	F54D5.7.2	K09H11.1.1	Probable glutaryl-CoA dehydrogenase, mitochondrial.	ACaD (ACAD, acyl-CoA Dehydrogenase) Sequence homolog.	0.643
F54D5.7	acox-1.1	F54D5.7.2	F08A8.1a.1	Probable glutaryl-CoA dehydrogenase, mitochondrial.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.912
F54D5.7	acox-1.2	F54D5.7.2	F08A8.2.1	Probable glutaryl-CoA dehydrogenase, mitochondrial.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.912
F54D5.7	acox-1.3	F54D5.7.2	F08A8.3.1	Probable glutaryl-CoA dehydrogenase, mitochondrial.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.912
F54D5.7	acox-1.4	F54D5.7.2	F08A8.4.2	Probable glutaryl-CoA dehydrogenase, mitochondrial.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.912
F54D5.7	acox-1.5	F54D5.7.2	C48B4.1.1	Probable glutaryl-CoA dehydrogenase, mitochondrial.	Probable peroxisomal acyl-coenzyme A oxidase 1.5; Catalyzes the desaturation of acyl-CoAs to 2-trans-enoyl- CoAs.	0.912
F54D5.7	acox-1.6	F54D5.7.2	F59F4.1.1	Probable glutaryl-CoA dehydrogenase, mitochondrial.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.940
acdh-1	F54D5.7	C55B7.4a.1	F54D5.7.2	Acyl CoA DeHydrogenase.	Probable glutaryl-CoA dehydrogenase, mitochondrial.	0.912
acdh-1	acdh-3	C55B7.4a.1	K06A5.6.2	Acyl CoA DeHydrogenase.	Acyl CoA DeHydrogenase.	0.902
acdh-1	acdh-4	C55B7.4a.1	T10E9.9b.1	Acyl CoA DeHydrogenase.	Acyl CoA DeHydrogenase.	0.901
acdh-1	acox-1.1	C55B7.4a.1	F08A8.1a.1	Acyl CoA DeHydrogenase.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.484
acdh-1	acox-1.2	C55B7.4a.1	F08A8.2.1	Acyl CoA DeHydrogenase.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.620
acdh-1	acox-1.3	C55B7.4a.1	F08A8.3.1	Acyl CoA DeHydrogenase.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.471