11 items (Caenorhabditis elegans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	pks-1	PolyKetide Synthase. (7752 aa)
	pnk-1	PaNtothenate Kinase. (449 aa)
	pnk-4	Pantothenate kinase; Belongs to the type II pantothenate kinase family. (755 aa)
	F25H9.6	Flavoprotein domain-containing protein. (237 aa)
	fasn-1	Carrier domain-containing protein. (2613 aa)
	F32H2.6	Ketoacyl_synth_N domain-containing protein. (187 aa)
	T04G9.4	ACPS domain-containing protein. (297 aa)
	T05G5.5	Uncharacterized protein T05G5.5; Belongs to the CoaE family. (246 aa)
	T28H10.1	ACPS domain-containing protein. (285 aa)
	Y65B4A.8	CTP_transf_like domain-containing protein. (461 aa)
	Y71H2AM.6	Uncharacterized protein. (277 aa)

Your Current Organism:

Caenorhabditis elegans

NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F25H9.6	T05G5.5	F25H9.6.1	T05G5.5d.1	Flavoprotein domain-containing protein.	Uncharacterized protein T05G5.5; Belongs to the CoaE family.	0.834
F25H9.6	Y65B4A.8	F25H9.6.1	Y65B4A.8.1	Flavoprotein domain-containing protein.	CTP_transf_like domain-containing protein.	0.993
F25H9.6	Y71H2AM.6	F25H9.6.1	Y71H2AM.6a.1	Flavoprotein domain-containing protein.	Uncharacterized protein.	0.993
F25H9.6	pnk-1	F25H9.6.1	C10G11.5a.1	Flavoprotein domain-containing protein.	PaNtothenate Kinase.	0.889
F25H9.6	pnk-4	F25H9.6.1	C42D8.3.1	Flavoprotein domain-containing protein.	Pantothenate kinase; Belongs to the type II pantothenate kinase family.	0.998
F32H2.6	T04G9.4	F32H2.6.1	T04G9.4.1	Ketoacyl_synth_N domain-containing protein.	ACPS domain-containing protein.	0.644
F32H2.6	T28H10.1	F32H2.6.1	T28H10.1.1	Ketoacyl_synth_N domain-containing protein.	ACPS domain-containing protein.	0.632
F32H2.6	pks-1	F32H2.6.1	C41A3.1a.1	Ketoacyl_synth_N domain-containing protein.	PolyKetide Synthase.	0.909
T04G9.4	F32H2.6	T04G9.4.1	F32H2.6.1	ACPS domain-containing protein.	Ketoacyl_synth_N domain-containing protein.	0.644
T04G9.4	T05G5.5	T04G9.4.1	T05G5.5d.1	ACPS domain-containing protein.	Uncharacterized protein T05G5.5; Belongs to the CoaE family.	0.916
T04G9.4	T28H10.1	T04G9.4.1	T28H10.1.1	ACPS domain-containing protein.	ACPS domain-containing protein.	0.908
T04G9.4	Y65B4A.8	T04G9.4.1	Y65B4A.8.1	ACPS domain-containing protein.	CTP_transf_like domain-containing protein.	0.900
T04G9.4	fasn-1	T04G9.4.1	F32H2.5.1	ACPS domain-containing protein.	Carrier domain-containing protein.	0.662
T04G9.4	pks-1	T04G9.4.1	C41A3.1a.1	ACPS domain-containing protein.	PolyKetide Synthase.	0.986
T05G5.5	F25H9.6	T05G5.5d.1	F25H9.6.1	Uncharacterized protein T05G5.5; Belongs to the CoaE family.	Flavoprotein domain-containing protein.	0.834
T05G5.5	T04G9.4	T05G5.5d.1	T04G9.4.1	Uncharacterized protein T05G5.5; Belongs to the CoaE family.	ACPS domain-containing protein.	0.916
T05G5.5	T28H10.1	T05G5.5d.1	T28H10.1.1	Uncharacterized protein T05G5.5; Belongs to the CoaE family.	ACPS domain-containing protein.	0.916
T05G5.5	Y65B4A.8	T05G5.5d.1	Y65B4A.8.1	Uncharacterized protein T05G5.5; Belongs to the CoaE family.	CTP_transf_like domain-containing protein.	0.993
T05G5.5	Y71H2AM.6	T05G5.5d.1	Y71H2AM.6a.1	Uncharacterized protein T05G5.5; Belongs to the CoaE family.	Uncharacterized protein.	0.833
T05G5.5	pnk-1	T05G5.5d.1	C10G11.5a.1	Uncharacterized protein T05G5.5; Belongs to the CoaE family.	PaNtothenate Kinase.	0.823