Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| C23H4.6 | H21P03.2 | C23H4.6a.1 | H21P03.2.1 | AAA_23 domain-containing protein. | Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. | 0.961 |
| C23H4.6 | T04A8.8 | C23H4.6a.1 | T04A8.8.1 | AAA_23 domain-containing protein. | Rad60-SLD domain-containing protein. | 0.427 |
| C23H4.6 | T27A3.7 | C23H4.6a.1 | T27A3.7.1 | AAA_23 domain-containing protein. | Phorbol-ester/DAG-type domain-containing protein. | 0.961 |
| C23H4.6 | ZK1248.11 | C23H4.6a.1 | ZK1248.11.1 | AAA_23 domain-containing protein. | SP-RING-type domain-containing protein. | 0.961 |
| C23H4.6 | him-6 | C23H4.6a.1 | T04A11.6.1 | AAA_23 domain-containing protein. | Bloom syndrome protein homolog; Participates in DNA replication and repair (By similarity). Exhibits a magnesium-dependent ATP-dependent DNA-helicase activity that unwinds single- and double-stranded DNA in a 3'-5' direction (By similarity). Negatively regulates sister chromatid exchange (SCE) ; Belongs to the helicase family. RecQ subfamily. | 0.601 |
| C23H4.6 | smc-5 | C23H4.6a.1 | C27A2.1.1 | AAA_23 domain-containing protein. | Structural maintenance of chromosomes protein 5; Core component of the smc-5/smc-6 complex. Functions in DNA double strand break repair by promoting sister- chromatid homologous recombination during meiosis. Acts in a DNA repair pathway for removal of ionizing radiation- and ultraviolet (UV) radiation-induced DNA lesions that is distinct from classical nucleotide excision repair and the translesion synthesis pathway. Also involved in the recovery of stalled replication forks. Belongs to the SMC family. SMC5 subfamily. | 0.967 |
| C23H4.6 | smc-6 | C23H4.6a.1 | F54D5.14.1 | AAA_23 domain-containing protein. | Structural maintenance of chromosomes protein 6 homolog smc-6; Core component of the smc-5/smc-6 complex. Involved in DNA double-strand break repair by promoting sister- chromatid homologous recombination during meiosis. Also plays a role in the DNA damage repair of ultraviolet (UV) radiation-induced DNA lesions. Promotes efficient DNA replication. | 0.551 |
| C23H4.6 | smo-1 | C23H4.6a.1 | K12C11.2.1 | AAA_23 domain-containing protein. | Small ubiquitin-related modifier; Ubiquitin-like protein which can be covalently attached to target lysines as a monomer. Does not seem to be involved in protein degradation and may function as an antagonist of ubiquitin in the degradation process. Plays a role in a number of cellular processes such as nuclear transport, DNA replication and repair, mitosis and signal transduction. Covalent attachment to its substrates requires prior activation by the E1 complex aos-1-uba-2 and linkage to the E2 enzyme ubc-9, and can be promoted by an E3 ligase such as gei-17. Required for embryonic dev [...] | 0.422 |
| C23H4.6 | wrn-1 | C23H4.6a.1 | F18C5.2.1 | AAA_23 domain-containing protein. | Probable Werner syndrome ATP-dependent helicase homolog 1; Essential for the formation of DNA replication focal centers; stably associates with foci elements generating binding sites for RP-A. Exhibits a magnesium-dependent ATP-dependent DNA-helicase activity. May be involved in the control of genomic stability (By similarity). | 0.601 |
| F29B9.8 | T04A8.8 | F29B9.8.2 | T04A8.8.1 | Uncharacterized protein. | Rad60-SLD domain-containing protein. | 0.631 |
| F29B9.8 | ZK1248.11 | F29B9.8.2 | ZK1248.11.1 | Uncharacterized protein. | SP-RING-type domain-containing protein. | 0.664 |
| F29B9.8 | smc-5 | F29B9.8.2 | C27A2.1.1 | Uncharacterized protein. | Structural maintenance of chromosomes protein 5; Core component of the smc-5/smc-6 complex. Functions in DNA double strand break repair by promoting sister- chromatid homologous recombination during meiosis. Acts in a DNA repair pathway for removal of ionizing radiation- and ultraviolet (UV) radiation-induced DNA lesions that is distinct from classical nucleotide excision repair and the translesion synthesis pathway. Also involved in the recovery of stalled replication forks. Belongs to the SMC family. SMC5 subfamily. | 0.424 |
| F29B9.8 | smo-1 | F29B9.8.2 | K12C11.2.1 | Uncharacterized protein. | Small ubiquitin-related modifier; Ubiquitin-like protein which can be covalently attached to target lysines as a monomer. Does not seem to be involved in protein degradation and may function as an antagonist of ubiquitin in the degradation process. Plays a role in a number of cellular processes such as nuclear transport, DNA replication and repair, mitosis and signal transduction. Covalent attachment to its substrates requires prior activation by the E1 complex aos-1-uba-2 and linkage to the E2 enzyme ubc-9, and can be promoted by an E3 ligase such as gei-17. Required for embryonic dev [...] | 0.877 |
| F42A6.5 | brc-1 | F42A6.5.1 | C36A4.8a.1 | BRCT domain-containing protein. | Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of polyubiquitin chains and plays a central role in DNA repair. Plays a role in triggering cellular responses at damage sites in response to DNA damage that may be induced by UV and ionizing radiation for example. Functions in double-strand break repair, and is required for homologous recombination between sister chromatids in meiotic and mitotic cells. In particular, protects against chromosome non-disjunction and nuclear fragmentation during meiotic double-strand [...] | 0.778 |
| F42A6.5 | him-6 | F42A6.5.1 | T04A11.6.1 | BRCT domain-containing protein. | Bloom syndrome protein homolog; Participates in DNA replication and repair (By similarity). Exhibits a magnesium-dependent ATP-dependent DNA-helicase activity that unwinds single- and double-stranded DNA in a 3'-5' direction (By similarity). Negatively regulates sister chromatid exchange (SCE) ; Belongs to the helicase family. RecQ subfamily. | 0.562 |
| F42A6.5 | rpa-1 | F42A6.5.1 | F18A1.5.1 | BRCT domain-containing protein. | Probable replication factor A 73 kDa subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. | 0.404 |
| F42A6.5 | sdz-24 | F42A6.5.1 | K07E8.3.3 | BRCT domain-containing protein. | OB domain-containing protein. | 0.713 |
| H21P03.2 | C23H4.6 | H21P03.2.1 | C23H4.6a.1 | Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. | AAA_23 domain-containing protein. | 0.961 |
| H21P03.2 | T04A8.8 | H21P03.2.1 | T04A8.8.1 | Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. | Rad60-SLD domain-containing protein. | 0.459 |
| H21P03.2 | T27A3.7 | H21P03.2.1 | T27A3.7.1 | Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. | Phorbol-ester/DAG-type domain-containing protein. | 0.997 |
page 1 of 8