Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| F29B9.8 | T04A8.8 | F29B9.8.2 | T04A8.8.1 | Uncharacterized protein. | Rad60-SLD domain-containing protein. | 0.631 |
| F29B9.8 | gei-17 | F29B9.8.2 | W10D5.3c.3 | Uncharacterized protein. | E3 SUMO-protein ligase gei-17; Functions as an E3-type smo-1 ligase. Mediates smo-1 conjugation to air-2 in vitro and is required for proper chromosome alignment. In the early embryo, specifically suppresses checkpoint activation in response to DNA damage, maybe by promoting mus-101 sumoylation. In embryos, plays a role in determining telomere localization in the nucleus. | 0.844 |
| F29B9.8 | miz-1 | F29B9.8.2 | R13.4a.1 | Uncharacterized protein. | SP-RING-type domain-containing protein. | 0.597 |
| F29B9.8 | smo-1 | F29B9.8.2 | K12C11.2.1 | Uncharacterized protein. | Small ubiquitin-related modifier; Ubiquitin-like protein which can be covalently attached to target lysines as a monomer. Does not seem to be involved in protein degradation and may function as an antagonist of ubiquitin in the degradation process. Plays a role in a number of cellular processes such as nuclear transport, DNA replication and repair, mitosis and signal transduction. Covalent attachment to its substrates requires prior activation by the E1 complex aos-1-uba-2 and linkage to the E2 enzyme ubc-9, and can be promoted by an E3 ligase such as gei-17. Required for embryonic dev [...] | 0.877 |
| H42K12.3 | T04A8.8 | H42K12.3.1 | T04A8.8.1 | Uncharacterized protein. | Rad60-SLD domain-containing protein. | 0.631 |
| H42K12.3 | gei-17 | H42K12.3.1 | W10D5.3c.3 | Uncharacterized protein. | E3 SUMO-protein ligase gei-17; Functions as an E3-type smo-1 ligase. Mediates smo-1 conjugation to air-2 in vitro and is required for proper chromosome alignment. In the early embryo, specifically suppresses checkpoint activation in response to DNA damage, maybe by promoting mus-101 sumoylation. In embryos, plays a role in determining telomere localization in the nucleus. | 0.597 |
| H42K12.3 | miz-1 | H42K12.3.1 | R13.4a.1 | Uncharacterized protein. | SP-RING-type domain-containing protein. | 0.597 |
| H42K12.3 | smo-1 | H42K12.3.1 | K12C11.2.1 | Uncharacterized protein. | Small ubiquitin-related modifier; Ubiquitin-like protein which can be covalently attached to target lysines as a monomer. Does not seem to be involved in protein degradation and may function as an antagonist of ubiquitin in the degradation process. Plays a role in a number of cellular processes such as nuclear transport, DNA replication and repair, mitosis and signal transduction. Covalent attachment to its substrates requires prior activation by the E1 complex aos-1-uba-2 and linkage to the E2 enzyme ubc-9, and can be promoted by an E3 ligase such as gei-17. Required for embryonic dev [...] | 0.631 |
| T04A8.8 | F29B9.8 | T04A8.8.1 | F29B9.8.2 | Rad60-SLD domain-containing protein. | Uncharacterized protein. | 0.631 |
| T04A8.8 | H42K12.3 | T04A8.8.1 | H42K12.3.1 | Rad60-SLD domain-containing protein. | Uncharacterized protein. | 0.631 |
| T04A8.8 | gei-17 | T04A8.8.1 | W10D5.3c.3 | Rad60-SLD domain-containing protein. | E3 SUMO-protein ligase gei-17; Functions as an E3-type smo-1 ligase. Mediates smo-1 conjugation to air-2 in vitro and is required for proper chromosome alignment. In the early embryo, specifically suppresses checkpoint activation in response to DNA damage, maybe by promoting mus-101 sumoylation. In embryos, plays a role in determining telomere localization in the nucleus. | 0.787 |
| T04A8.8 | miz-1 | T04A8.8.1 | R13.4a.1 | Rad60-SLD domain-containing protein. | SP-RING-type domain-containing protein. | 0.787 |
| T04A8.8 | ubc-9 | T04A8.8.1 | F29B9.6.2 | Rad60-SLD domain-containing protein. | SUMO-conjugating enzyme UBC9; Accepts the ubiquitin-like protein smo-1 from the aos-1-uba-2 E1 complex and catalyzes its covalent attachment to other proteins with the help of an E3 ligase such as gei-17. Required to sumoylate the ETS transcription factor lin-1 and the Polycomb protein sop-2. Required for embryonic development, fertility, vulval morphogenesis and inhibition of vulval cell fates. Belongs to the ubiquitin-conjugating enzyme family. | 0.736 |
| T04A8.8 | uev-2 | T04A8.8.1 | F56D2.4.1 | Rad60-SLD domain-containing protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein. | 0.631 |
| gei-17 | F29B9.8 | W10D5.3c.3 | F29B9.8.2 | E3 SUMO-protein ligase gei-17; Functions as an E3-type smo-1 ligase. Mediates smo-1 conjugation to air-2 in vitro and is required for proper chromosome alignment. In the early embryo, specifically suppresses checkpoint activation in response to DNA damage, maybe by promoting mus-101 sumoylation. In embryos, plays a role in determining telomere localization in the nucleus. | Uncharacterized protein. | 0.844 |
| gei-17 | H42K12.3 | W10D5.3c.3 | H42K12.3.1 | E3 SUMO-protein ligase gei-17; Functions as an E3-type smo-1 ligase. Mediates smo-1 conjugation to air-2 in vitro and is required for proper chromosome alignment. In the early embryo, specifically suppresses checkpoint activation in response to DNA damage, maybe by promoting mus-101 sumoylation. In embryos, plays a role in determining telomere localization in the nucleus. | Uncharacterized protein. | 0.597 |
| gei-17 | T04A8.8 | W10D5.3c.3 | T04A8.8.1 | E3 SUMO-protein ligase gei-17; Functions as an E3-type smo-1 ligase. Mediates smo-1 conjugation to air-2 in vitro and is required for proper chromosome alignment. In the early embryo, specifically suppresses checkpoint activation in response to DNA damage, maybe by promoting mus-101 sumoylation. In embryos, plays a role in determining telomere localization in the nucleus. | Rad60-SLD domain-containing protein. | 0.787 |
| gei-17 | hlh-30 | W10D5.3c.3 | W02C12.3c.1 | E3 SUMO-protein ligase gei-17; Functions as an E3-type smo-1 ligase. Mediates smo-1 conjugation to air-2 in vitro and is required for proper chromosome alignment. In the early embryo, specifically suppresses checkpoint activation in response to DNA damage, maybe by promoting mus-101 sumoylation. In embryos, plays a role in determining telomere localization in the nucleus. | BHLH domain-containing protein. | 0.491 |
| gei-17 | hsr-9 | W10D5.3c.3 | T05F1.6.1 | E3 SUMO-protein ligase gei-17; Functions as an E3-type smo-1 ligase. Mediates smo-1 conjugation to air-2 in vitro and is required for proper chromosome alignment. In the early embryo, specifically suppresses checkpoint activation in response to DNA damage, maybe by promoting mus-101 sumoylation. In embryos, plays a role in determining telomere localization in the nucleus. | Protein hsr-9; May have a role in DNA double-strand break repair following gamma-irradiation. | 0.588 |
| gei-17 | smo-1 | W10D5.3c.3 | K12C11.2.1 | E3 SUMO-protein ligase gei-17; Functions as an E3-type smo-1 ligase. Mediates smo-1 conjugation to air-2 in vitro and is required for proper chromosome alignment. In the early embryo, specifically suppresses checkpoint activation in response to DNA damage, maybe by promoting mus-101 sumoylation. In embryos, plays a role in determining telomere localization in the nucleus. | Small ubiquitin-related modifier; Ubiquitin-like protein which can be covalently attached to target lysines as a monomer. Does not seem to be involved in protein degradation and may function as an antagonist of ubiquitin in the degradation process. Plays a role in a number of cellular processes such as nuclear transport, DNA replication and repair, mitosis and signal transduction. Covalent attachment to its substrates requires prior activation by the E1 complex aos-1-uba-2 and linkage to the E2 enzyme ubc-9, and can be promoted by an E3 ligase such as gei-17. Required for embryonic dev [...] | 0.998 |
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