Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| C10A4.1 | smo-1 | C10A4.1.1 | K12C11.2.1 | Dimer_Tnp_hAT domain-containing protein. | Small ubiquitin-related modifier; Ubiquitin-like protein which can be covalently attached to target lysines as a monomer. Does not seem to be involved in protein degradation and may function as an antagonist of ubiquitin in the degradation process. Plays a role in a number of cellular processes such as nuclear transport, DNA replication and repair, mitosis and signal transduction. Covalent attachment to its substrates requires prior activation by the E1 complex aos-1-uba-2 and linkage to the E2 enzyme ubc-9, and can be promoted by an E3 ligase such as gei-17. Required for embryonic dev [...] | 0.445 |
| C10A4.1 | ubc-9 | C10A4.1.1 | F29B9.6.2 | Dimer_Tnp_hAT domain-containing protein. | SUMO-conjugating enzyme UBC9; Accepts the ubiquitin-like protein smo-1 from the aos-1-uba-2 E1 complex and catalyzes its covalent attachment to other proteins with the help of an E3 ligase such as gei-17. Required to sumoylate the ETS transcription factor lin-1 and the Polycomb protein sop-2. Required for embryonic development, fertility, vulval morphogenesis and inhibition of vulval cell fates. Belongs to the ubiquitin-conjugating enzyme family. | 0.490 |
| C53D6.6 | smo-1 | C53D6.6.2 | K12C11.2.1 | Dimer_Tnp_hAT domain-containing protein. | Small ubiquitin-related modifier; Ubiquitin-like protein which can be covalently attached to target lysines as a monomer. Does not seem to be involved in protein degradation and may function as an antagonist of ubiquitin in the degradation process. Plays a role in a number of cellular processes such as nuclear transport, DNA replication and repair, mitosis and signal transduction. Covalent attachment to its substrates requires prior activation by the E1 complex aos-1-uba-2 and linkage to the E2 enzyme ubc-9, and can be promoted by an E3 ligase such as gei-17. Required for embryonic dev [...] | 0.445 |
| C53D6.6 | ubc-9 | C53D6.6.2 | F29B9.6.2 | Dimer_Tnp_hAT domain-containing protein. | SUMO-conjugating enzyme UBC9; Accepts the ubiquitin-like protein smo-1 from the aos-1-uba-2 E1 complex and catalyzes its covalent attachment to other proteins with the help of an E3 ligase such as gei-17. Required to sumoylate the ETS transcription factor lin-1 and the Polycomb protein sop-2. Required for embryonic development, fertility, vulval morphogenesis and inhibition of vulval cell fates. Belongs to the ubiquitin-conjugating enzyme family. | 0.490 |
| F29B9.8 | T04A8.8 | F29B9.8.2 | T04A8.8.1 | Uncharacterized protein. | Rad60-SLD domain-containing protein. | 0.631 |
| F29B9.8 | smo-1 | F29B9.8.2 | K12C11.2.1 | Uncharacterized protein. | Small ubiquitin-related modifier; Ubiquitin-like protein which can be covalently attached to target lysines as a monomer. Does not seem to be involved in protein degradation and may function as an antagonist of ubiquitin in the degradation process. Plays a role in a number of cellular processes such as nuclear transport, DNA replication and repair, mitosis and signal transduction. Covalent attachment to its substrates requires prior activation by the E1 complex aos-1-uba-2 and linkage to the E2 enzyme ubc-9, and can be promoted by an E3 ligase such as gei-17. Required for embryonic dev [...] | 0.877 |
| H42K12.3 | T04A8.8 | H42K12.3.1 | T04A8.8.1 | Uncharacterized protein. | Rad60-SLD domain-containing protein. | 0.631 |
| H42K12.3 | smo-1 | H42K12.3.1 | K12C11.2.1 | Uncharacterized protein. | Small ubiquitin-related modifier; Ubiquitin-like protein which can be covalently attached to target lysines as a monomer. Does not seem to be involved in protein degradation and may function as an antagonist of ubiquitin in the degradation process. Plays a role in a number of cellular processes such as nuclear transport, DNA replication and repair, mitosis and signal transduction. Covalent attachment to its substrates requires prior activation by the E1 complex aos-1-uba-2 and linkage to the E2 enzyme ubc-9, and can be promoted by an E3 ligase such as gei-17. Required for embryonic dev [...] | 0.631 |
| K07F5.12 | npp-10 | K07F5.12.1 | ZK328.5b.1 | Uncharacterized protein. | Nuclear pore complex protein Nup98-Nup96; Nup98 and Nup96 play a role in the bidirectional transport across the nucleoporin complex (NPC). Required for the nuclear import of hcp-4 during mitotic prophase, this step is essential for centrosome assembly and resolution. Regulates nucleoporin npp-5 localization to the nuclear membrane during interphase and to kinetochores during metaphase. Has a role in P granule integrity; may promote the 'liquid phase' of P granules by increasing the number of interacting RNA-protein complexes. Binds nos-2 mRNA, probably indirectly, and promotes its accu [...] | 0.737 |
| K07F5.12 | npp-12 | K07F5.12.1 | T23H2.1.1 | Uncharacterized protein. | Nuclear Pore complex Protein. | 0.546 |
| K07F5.12 | npp-13 | K07F5.12.1 | Y37E3.15a.1 | Uncharacterized protein. | Nuclear pore protein. | 0.925 |
| K07F5.12 | npp-14 | K07F5.12.1 | C03D6.4.1 | Uncharacterized protein. | Nuclear pore complex protein 14; May serve as a docking site in the receptor-mediated import of substrates across the nuclear pore complex (By similarity). Plays a role in apoptosis by tethering caspase ced-3 to the nuclear membrane preventing its autoprocessing in absence of ced-4. | 0.918 |
| K07F5.12 | npp-15 | K07F5.12.1 | C29E4.4.1 | Uncharacterized protein. | Nuclear pore complex protein 15; Important for early nematode development. Belongs to the nucleoporin Nup133 family. | 0.931 |
| K07F5.12 | npp-16 | K07F5.12.1 | Y56A3A.17.2 | Uncharacterized protein. | Nuclear Pore complex Protein. | 0.493 |
| K07F5.12 | npp-18 | K07F5.12.1 | Y43F4B.4.1 | Uncharacterized protein. | Nucleoporin SEH1; Probable component of the nuclear pore complex (NPC) which is involved in the trafficking of macromolecules between the cytoplasm and nucleus. | 0.921 |
| K07F5.12 | npp-19 | K07F5.12.1 | R06F6.5b.1 | Uncharacterized protein. | Nucleoporin NUP35; Functions as a component of the nuclear pore complex (NPC) (By similarity). NPC components, collectively referred to as nucleoporins (NUPs), can play the role of both NPC structural components and of docking or interaction partners for transiently associated nuclear transport factors (By similarity). Required for the proper organization of chromosomes on the mitotic spindle during anaphase. | 0.760 |
| K07F5.12 | npp-2 | K07F5.12.1 | T01G9.4.2 | Uncharacterized protein. | Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). | 0.924 |
| K07F5.12 | npp-20 | K07F5.12.1 | Y77E11A.13a.1 | Uncharacterized protein. | Protein SEC13 homolog; Functions as a component of the nuclear pore complex (NPC) and the COPII coat (By similarity). Required for the nuclear import of hcp-4 during mitotic prophase, this step is essential for centrosome assembly and resolution. Belongs to the WD repeat SEC13 family. | 0.912 |
| K07F5.12 | npp-22 | K07F5.12.1 | B0240.4.1 | Uncharacterized protein. | Nucleoporin ndc-1; Component of the nuclear pore complex (NPC), which plays a key role in de novo assembly and insertion of NPC in the nuclear envelope; Belongs to the NDC1 family. | 0.721 |
| K07F5.12 | npp-23 | K07F5.12.1 | C09G9.2a.1 | Uncharacterized protein. | Nuclear Pore complex Protein. | 0.733 |
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