76 items (Caenorhabditis elegans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	mrpl-47	Mitochondrial Ribosomal Protein, Large. (234 aa)
	mrpl-11	Probable 39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family. (195 aa)
	mrps-30	Mitochondrial Ribosomal Protein, Small. (523 aa)
	oxa-1	OXA mitochondrial inner membrane insertase homolog. (366 aa)
	mrps-22	Mitochondrial Ribosomal Protein, Small. (418 aa)
	dap-3	Mammalian cell Death Associated Protein related. (375 aa)
	C24D10.6	CHCH domain-containing protein. (161 aa)
	mrpl-34	L51_S25_CI-B8 domain-containing protein. (189 aa)
	mrps-18C	Putative 39S ribosomal protein L3, mitochondrial. (403 aa)
	mrpl-32	Probable 39S ribosomal protein L32, mitochondrial. (183 aa)
	mrps-31	28S ribosomal protein S31, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mS31 family. (383 aa)
	tufm-2	Mitochondrial elongation factor Tu homologue. (439 aa)
	mrpl-48	Ribosomal_S10 domain-containing protein. (186 aa)
	mrpl-18	39S ribosomal protein L18, mitochondrial; Belongs to the universal ribosomal protein uL18 family. (170 aa)
	mrps-5	Putative 28S ribosomal protein S5, mitochondrial; Belongs to the universal ribosomal protein uS5 family. (436 aa)
	eral-1	Uncharacterized GTP-binding protein E02H1.2; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family. (394 aa)
	F02A9.10-2	Ribosomal protein L44, mitochondrial; Component of the mitochondrial ribosome. May have a function in the assembly/stability of nascent mitochondrial polypeptides exiting the ribosome. (394 aa)
	mrps-9	Probable 40S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family. (392 aa)
	mrpl-13	Mitochondrial Ribosomal Protein, Large. (205 aa)
	mrps-33	Mitochondrial Ribosomal Protein, Small. (126 aa)
	mrpl-54	Mitochondrial Ribosomal Protein, Large. (133 aa)
	mrps-21	Mitochondrial Ribosomal Protein, Small. (113 aa)
	gfm-1	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (750 aa)
	mrpl-1	Mitochondrial Ribosomal Protein, Large. (377 aa)
	mrps-24	28S ribosomal protein S24, mitochondrial; Belongs to the universal ribosomal protein uS3 family. (164 aa)
	mrpl-21	Mitochondrial Ribosomal Protein, Large. (171 aa)
	F46B6.6	Tr-type G domain-containing protein. (702 aa)
	mrpl-40	Mitochondrial Ribosomal Protein, Large. (189 aa)
	tsfm-1	Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. (316 aa)
	mrpl-2	Ribosomal_L2_C domain-containing protein. (321 aa)
	mrps-16	Probable 28S ribosomal protein S16, mitochondrial; Belongs to the bacterial ribosomal protein bS16 family. (147 aa)
	F58G1.8	EFG_II domain-containing protein. (83 aa)
	mrpl-24	Probable 39S ribosomal protein L24, mitochondrial. (278 aa)
	mrpl-10	Mitochondrial Ribosomal Protein, Large. (239 aa)
	K07A1.10	Uncharacterized protein. (205 aa)
	mrps-27	Ig-like domain-containing protein. (424 aa)
	mrpl-36	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. (77 aa)
	mrpl-35	Probable 39S ribosomal protein L35, mitochondrial. (158 aa)
	R02F2.9	RF_PROK_I domain-containing protein. (165 aa)
	mrpl-49	Probable 39S ribosomal protein L49, mitochondrial. (187 aa)
	mrps-14	Probable 40S ribosomal protein S14, mitochondrial; Belongs to the universal ribosomal protein uS14 family. (199 aa)
	mrps-12	Mitochondrial Ribosomal Protein, Small; Belongs to the universal ribosomal protein uS12 family. (157 aa)
	mrpl-16	Ribosomal_L16 domain-containing protein. (240 aa)
	mrpl-23	Probable 39S ribosomal protein L23, mitochondrial; Belongs to the universal ribosomal protein uL23 family. (159 aa)
	mrpl-51	39S ribosomal protein L51, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mL51 family. (199 aa)
	mrps-18B	Mitochondrial Ribosomal Protein, Small. (238 aa)
	mrps-18.C	Mitochondrial Ribosomal Protein, Small. (139 aa)
	mrrf-1	Ribosome-recycling factor, mitochondrial; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another (By similarity); Belongs to the RRF family. (238 aa)
	mrpl-4	Mitochondrial Ribosomal Protein, Large. (299 aa)
	mrps-2	Mitochondrial Ribosomal Protein, Small. (264 aa)
	mrpl-28	Mitochondrial Ribosomal Protein, Large. (310 aa)
	W03F8.3	Probable peptide chain release factor 1, mitochondrial; Mitochondrial peptide chain release factor that directs the termination of translation in response to the peptide chain termination codons UAA and UAG. (389 aa)
	mrpl-30	Mitochondrial Ribosomal Protein, Large. (197 aa)
	W04D2.4	C2H2-type domain-containing protein. (624 aa)
	mrps-11	Mitochondrial Ribosomal Protein, Small. (208 aa)
	mrpl-12	Mitochondrial Ribosomal Protein, Large. (173 aa)
	let-630	Uncharacterized protein. (664 aa)
	mrpl-19	Probable 39S ribosomal protein L19, mitochondrial. (288 aa)
	Y119D3B.14	Tr-type G domain-containing protein. (731 aa)
	mrpl-45	Probable 39S ribosomal protein L45, mitochondrial. (357 aa)
	mrpl-38	Mitochondrial Ribosomal Protein, Large. (413 aa)
	mrps-10	Probable 28S ribosomal protein S10, mitochondrial; Ribosomal protein required for normal mitochondrial function and normal larval development. Thought to have a role in insulin/IGF signaling. (156 aa)
	mrps-35	MRP-S28 domain-containing protein. (365 aa)
	mrps-28	Mitochondrial Ribosomal Protein, Small. (172 aa)
	mrpl-37	Mitochondrial Ribosomal Protein, Large. (432 aa)
	mrpl-17	Mitochondrial Ribosomal Protein, Large. (194 aa)
	mrps-25	Probable 28S ribosomal protein S25, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mS25 family. (170 aa)
	Y55F3AM.13	Uncharacterized protein. (354 aa)
	mrps-7	28S ribosomal protein S7, mitochondrial; Belongs to the universal ribosomal protein uS7 family. (222 aa)
	mrpl-55	Mitochondrial Ribosomal Protein, Large. (125 aa)
	tufm-1	Tr-type G domain-containing protein. (496 aa)
	Y92H12BR.3	Uncharacterized protein Y92H12BR.3. (637 aa)
	mrpl-15	Ribosomal_L18e/L15P domain-containing protein. (298 aa)
	mrps-18A	Mitochondrial Ribosomal Protein, Small. (183 aa)
	mrps-23	Probable 28S ribosomal protein S23, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mS23 family. (133 aa)
	ZK632.5	Uncharacterized protein ZK632.5. (824 aa)

Your Current Organism:

Caenorhabditis elegans

NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C24D10.6	F02A9.10-2	C24D10.6.1	F02A9.4.1	CHCH domain-containing protein.	Ribosomal protein L44, mitochondrial; Component of the mitochondrial ribosome. May have a function in the assembly/stability of nascent mitochondrial polypeptides exiting the ribosome.	0.885
C24D10.6	F46B6.6	C24D10.6.1	F46B6.6a.1	CHCH domain-containing protein.	Tr-type G domain-containing protein.	0.738
C24D10.6	F58G1.8	C24D10.6.1	F58G1.8.1	CHCH domain-containing protein.	EFG_II domain-containing protein.	0.464
C24D10.6	K07A1.10	C24D10.6.1	K07A1.10.2	CHCH domain-containing protein.	Uncharacterized protein.	0.894
C24D10.6	R02F2.9	C24D10.6.1	R02F2.9.1	CHCH domain-containing protein.	RF_PROK_I domain-containing protein.	0.908
C24D10.6	W03F8.3	C24D10.6.1	W03F8.3a.1	CHCH domain-containing protein.	Probable peptide chain release factor 1, mitochondrial; Mitochondrial peptide chain release factor that directs the termination of translation in response to the peptide chain termination codons UAA and UAG.	0.551
C24D10.6	W04D2.4	C24D10.6.1	W04D2.4.1	CHCH domain-containing protein.	C2H2-type domain-containing protein.	0.882
C24D10.6	Y55F3AM.13	C24D10.6.1	Y55F3AM.13.1	CHCH domain-containing protein.	Uncharacterized protein.	0.794
C24D10.6	Y92H12BR.3	C24D10.6.1	Y92H12BR.3a.1	CHCH domain-containing protein.	Uncharacterized protein Y92H12BR.3.	0.700
C24D10.6	dap-3	C24D10.6.1	C14A4.2.1	CHCH domain-containing protein.	Mammalian cell Death Associated Protein related.	0.975
C24D10.6	eral-1	C24D10.6.1	E02H1.2.1	CHCH domain-containing protein.	Uncharacterized GTP-binding protein E02H1.2; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family.	0.839
C24D10.6	gfm-1	C24D10.6.1	F29C12.4.2	CHCH domain-containing protein.	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	0.470
C24D10.6	let-630	C24D10.6.1	Y110A7A.19.1	CHCH domain-containing protein.	Uncharacterized protein.	0.977
C24D10.6	mrpl-1	C24D10.6.1	F33D4.5.1	CHCH domain-containing protein.	Mitochondrial Ribosomal Protein, Large.	0.681
C24D10.6	mrpl-10	C24D10.6.1	K01C8.6.1	CHCH domain-containing protein.	Mitochondrial Ribosomal Protein, Large.	0.890
C24D10.6	mrpl-11	C24D10.6.1	B0303.15.1	CHCH domain-containing protein.	Probable 39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	0.796
C24D10.6	mrpl-12	C24D10.6.1	W09D10.3.1	CHCH domain-containing protein.	Mitochondrial Ribosomal Protein, Large.	0.885
C24D10.6	mrpl-13	C24D10.6.1	F13G3.11.1	CHCH domain-containing protein.	Mitochondrial Ribosomal Protein, Large.	0.943
C24D10.6	mrpl-15	C24D10.6.1	Y92H12BR.8.1	CHCH domain-containing protein.	Ribosomal_L18e/L15P domain-containing protein.	0.706
C24D10.6	mrpl-16	C24D10.6.1	T04A8.11.1	CHCH domain-containing protein.	Ribosomal_L16 domain-containing protein.	0.909