STRINGSTRING
vps-20 vps-20 C01A2.4 C01A2.4 vps-32.1 vps-32.1 cyc-2.1 cyc-2.1 T24B8.2 T24B8.2 vps-24 vps-24 cyc-2.2 cyc-2.2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
vps-20Related to yeast Vacuolar Protein Sorting factor. (208 aa)
C01A2.4Uncharacterized protein. (207 aa)
vps-32.1Related to yeast Vacuolar Protein Sorting factor. (221 aa)
cyc-2.1Cytochrome c 2.1; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (111 aa)
T24B8.2Charged Multivesicular Body Protein homolog. (411 aa)
vps-24Related to yeast Vacuolar Protein Sorting factor. (208 aa)
cyc-2.2Probable cytochrome c 2.2; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (By similarity). (123 aa)
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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