STRINGSTRING
Y104H12D.2 Y104H12D.2 his-48 his-48 his-46 his-46 his-41 his-41 his-37 his-37 his-54 his-54 his-52 his-52 his-50 his-50 his-44 his-44 his-31 his-31 his-34 his-34 his-67 his-67 his-1 his-1 his-4 his-4 R13A5.10 R13A5.10 nth-1 nth-1 his-20 his-20 his-28 his-28 his-18 his-18 his-22 his-22 his-38 his-38 JC8.4 JC8.4 his-66 his-66 his-62 his-62 his-60 his-60 his-58 his-58 his-56 his-56 his-5 his-5 his-39 his-39 his-8 his-8 F44E2.8 F44E2.8 his-29 his-29 his-64 his-64 his-10 his-10 his-11 his-11 his-14 his-14 his-15 his-15 Y104H12D.4 Y104H12D.4 Y48A6B.7 Y48A6B.7 ung-1 ung-1 his-26 his-26
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Y104H12D.2Uncharacterized protein. (327 aa)
his-48Probable histone H2B 4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (123 aa)
his-46Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
his-41Probable histone H2B 3; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (123 aa)
his-37Histone H4. (103 aa)
his-54Histone H2B 2; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (123 aa)
his-52Histone H2B 2. (123 aa)
his-50Histone H4. (103 aa)
his-44Histone H2B 1; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (122 aa)
his-31Histone H4. (103 aa)
his-34Histone H2B 1. (122 aa)
his-67Histone H4. (103 aa)
his-1Histone H4. (103 aa)
his-4Histone H2B 2. (123 aa)
R13A5.10CMP/dCMP-type deaminase domain-containing protein. (153 aa)
nth-1Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines; Belongs to the Nth/MutY family. (298 aa)
his-20Histone H2B 2. (123 aa)
his-28Histone H4. (103 aa)
his-18Histone H4. (103 aa)
his-22Histone H2B 2. (123 aa)
his-38Histone H4. (103 aa)
JC8.4CMP/dCMP-type deaminase domain-containing protein. (176 aa)
his-66Probable histone H2B 4. (123 aa)
his-62Probable histone H2B 4. (123 aa)
his-60Histone H4. (103 aa)
his-58Probable histone H2B 4. (123 aa)
his-56Histone H4. (103 aa)
his-5Histone H4. (103 aa)
his-39Histone domain-containing protein; Belongs to the histone H2B family. (67 aa)
his-8Histone H2B 2. (123 aa)
F44E2.8Uncharacterized protein F44E2.8. (308 aa)
his-29Histone H2B 1. (122 aa)
his-64Histone H4. (103 aa)
his-10Histone H4. (103 aa)
his-11Histone H2B 1. (122 aa)
his-14Histone H4. (103 aa)
his-15Histone H2B 1. (122 aa)
Y104H12D.4Uncharacterized protein. (107 aa)
Y48A6B.7CMP/dCMP-type deaminase domain-containing protein. (168 aa)
ung-1Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (282 aa)
his-26Histone H4. (103 aa)
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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