Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| C56G7.3 | ced-12 | C56G7.3a.1 | Y106G6E.5b.1 | ELMO domain-containing protein C56G7.3. | Cell death abnormality protein 12; Involved in programmed apoptosis and necrosis. Required for the cell corpse engulfment process. Has roles in the formation of actin halos and distal tip cell migration. Negatively regulates the unc-6/Netrin receptor unc-5 to control distal tip cell migration along the anterior-posterior axis of the body. Plays no role in amphid axon outgrowth. | 0.483 |
| F34H10.1 | F52C6.2 | F34H10.1.1 | F52C6.2.1 | Probable ribosomal protein F34H10.1; Belongs to the eukaryotic ribosomal protein eS31 family. | Ubiquitin-like domain-containing protein. | 0.561 |
| F34H10.1 | F52C6.3 | F34H10.1.1 | F52C6.3.1 | Probable ribosomal protein F34H10.1; Belongs to the eukaryotic ribosomal protein eS31 family. | Ubiquitin-like domain-containing protein. | 0.561 |
| F34H10.1 | kxd-1 | F34H10.1.1 | C13F10.2.1 | Probable ribosomal protein F34H10.1; Belongs to the eukaryotic ribosomal protein eS31 family. | KxDL domain-containing protein. | 0.508 |
| F34H10.1 | ubq-1 | F34H10.1.1 | F25B5.4a.2 | Probable ribosomal protein F34H10.1; Belongs to the eukaryotic ribosomal protein eS31 family. | Ubiquitin-related; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is involved in protein degrad [...] | 0.561 |
| F34H10.1 | ubq-2 | F34H10.1.1 | ZK1010.1.1 | Probable ribosomal protein F34H10.1; Belongs to the eukaryotic ribosomal protein eS31 family. | Ubiquitin-60S ribosomal protein L40; [Ubiquitin]: exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is invol [...] | 0.966 |
| F52C6.2 | F34H10.1 | F52C6.2.1 | F34H10.1.1 | Ubiquitin-like domain-containing protein. | Probable ribosomal protein F34H10.1; Belongs to the eukaryotic ribosomal protein eS31 family. | 0.561 |
| F52C6.2 | K08C9.7 | F52C6.2.1 | K08C9.7.1 | Ubiquitin-like domain-containing protein. | Uncharacterized protein. | 0.563 |
| F52C6.2 | kxd-1 | F52C6.2.1 | C13F10.2.1 | Ubiquitin-like domain-containing protein. | KxDL domain-containing protein. | 0.465 |
| F52C6.2 | ubl-1 | F52C6.2.1 | H06I04.4a.3 | Ubiquitin-like domain-containing protein. | Ubiquitin-like protein 1-40S ribosomal protein S27a; In the C-terminal section; belongs to the eukaryotic ribosomal protein eS31 family. | 0.701 |
| F52C6.2 | ubq-2 | F52C6.2.1 | ZK1010.1.1 | Ubiquitin-like domain-containing protein. | Ubiquitin-60S ribosomal protein L40; [Ubiquitin]: exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is invol [...] | 0.885 |
| F52C6.3 | F34H10.1 | F52C6.3.1 | F34H10.1.1 | Ubiquitin-like domain-containing protein. | Probable ribosomal protein F34H10.1; Belongs to the eukaryotic ribosomal protein eS31 family. | 0.561 |
| F52C6.3 | K08C9.7 | F52C6.3.1 | K08C9.7.1 | Ubiquitin-like domain-containing protein. | Uncharacterized protein. | 0.561 |
| F52C6.3 | kxd-1 | F52C6.3.1 | C13F10.2.1 | Ubiquitin-like domain-containing protein. | KxDL domain-containing protein. | 0.467 |
| F52C6.3 | let-23 | F52C6.3.1 | ZK1067.1d.1 | Ubiquitin-like domain-containing protein. | Receptor tyrosine-protein kinase let-23; Tyrosine-protein kinase receptor which, upon binding ligand lin-3, activates 2 signaling cascades: the let-60/Ras and MAP kinase signaling pathway and the let-60-independent phospholipase C-mediated Ca(2+) signaling pathway. Each pathway regulates distinct functions. By activating let-60/Ras, regulates larval development, induction of vulva cell precursors during vulva development, male spicule formation and posterior development of the epidermis. Probably by activating phospholipase plc-3 and inositol 1,4,5-trisphosphate receptor itr-1 signalin [...] | 0.607 |
| F52C6.3 | let-60 | F52C6.3.1 | ZK792.6.1 | Ubiquitin-like domain-containing protein. | Ras protein let-60; The level of let-60 controls the switch between vulval and hypodermal cell fates during C.elegans vulval induction. May stimulate the guanine nucleotide exchange factor (GEF) activity of rap-1. Belongs to the small GTPase superfamily. Ras family. | 0.574 |
| F52C6.3 | nipi-4 | F52C6.3.1 | F40A3.5.1 | Ubiquitin-like domain-containing protein. | Protein nipi-4; Pseudokinase which plays a role in resistance to fungal infection by promoting expression of antimicrobial peptides (nlp-29, nlp-31, nlp-34, cnc-1, cnc-2 and cnc-4) in the epidermis. In addition, up-regulates nlp-29 expression upon physical wounding and in response to phorbol ester PMA treatment; Belongs to the protein kinase superfamily. Tyr protein kinase family. | 0.571 |
| F52C6.3 | ubl-1 | F52C6.3.1 | H06I04.4a.3 | Ubiquitin-like domain-containing protein. | Ubiquitin-like protein 1-40S ribosomal protein S27a; In the C-terminal section; belongs to the eukaryotic ribosomal protein eS31 family. | 0.561 |
| F52C6.3 | ubq-1 | F52C6.3.1 | F25B5.4a.2 | Ubiquitin-like domain-containing protein. | Ubiquitin-related; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is involved in protein degrad [...] | 0.486 |
| F52C6.3 | ubq-2 | F52C6.3.1 | ZK1010.1.1 | Ubiquitin-like domain-containing protein. | Ubiquitin-60S ribosomal protein L40; [Ubiquitin]: exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is invol [...] | 0.920 |
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