Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| F14H12.3 | ran-2 | F14H12.3.1 | C29E4.3a.1 | Uncharacterized protein. | Ran GTPase-activating protein 2; GTPase system comprising ran-1, ran-2 and ran-3 is essential in nucleocytoplasmic trafficking. Ran-2 is a GTPase activator for the nuclear RAS-related regulatory protein Ran, converting it to the putatively inactive GDP-bound state. Required for correct chromosome alignment and segregation on the metaphase plate. | 0.925 |
| F14H12.3 | ran-3 | F14H12.3.1 | C26D10.1.1 | Uncharacterized protein. | Regulator of chromosome condensation; Key component of the Ran GTPase system, which comprises ran- 1, ran-2 and ran-3 and is essential in nucleocytoplasmic transport. Promotes the exchange of Ran-bound GDP by GTP and regulates the onset of chromosome condensation in the S phase. Binds to the chromatin. RCC1 (ran-3)/RAN (ran-1) complex (together with other proteins) acts as a component of a signal transmission pathway that detects unreplicated DNA. | 0.525 |
| T04D3.1 | mel-28 | T04D3.1.1 | C38D4.3.1 | Uncharacterized protein. | Protein mel-28; Nuclear envelope protein which has essential roles in assembly of nuclear pore complexes and in chromatin maintenance during the cell cycle. Appears to be a stable structural component of the nuclear envelope during interphase. In dividing cells, localizes to kinetochores during early stages of mitosis and then to chromatin during late mitosis. Important for several mitotic processes including chromosome condensation, kinetochore assembly, chromosome segregation and cell-cycle timing. In postmitotic cells, plays a role in the early steps of nuclear pore complex assembly [...] | 0.584 |
| T04D3.1 | npp-13 | T04D3.1.1 | Y37E3.15a.1 | Uncharacterized protein. | Nuclear pore protein. | 0.661 |
| T04D3.1 | npp-15 | T04D3.1.1 | C29E4.4.1 | Uncharacterized protein. | Nuclear pore complex protein 15; Important for early nematode development. Belongs to the nucleoporin Nup133 family. | 0.628 |
| T04D3.1 | npp-18 | T04D3.1.1 | Y43F4B.4.1 | Uncharacterized protein. | Nucleoporin SEH1; Probable component of the nuclear pore complex (NPC) which is involved in the trafficking of macromolecules between the cytoplasm and nucleus. | 0.576 |
| T04D3.1 | npp-19 | T04D3.1.1 | R06F6.5b.1 | Uncharacterized protein. | Nucleoporin NUP35; Functions as a component of the nuclear pore complex (NPC) (By similarity). NPC components, collectively referred to as nucleoporins (NUPs), can play the role of both NPC structural components and of docking or interaction partners for transiently associated nuclear transport factors (By similarity). Required for the proper organization of chromosomes on the mitotic spindle during anaphase. | 0.429 |
| T04D3.1 | npp-2 | T04D3.1.1 | T01G9.4.2 | Uncharacterized protein. | Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). | 0.630 |
| T04D3.1 | npp-20 | T04D3.1.1 | Y77E11A.13a.1 | Uncharacterized protein. | Protein SEC13 homolog; Functions as a component of the nuclear pore complex (NPC) and the COPII coat (By similarity). Required for the nuclear import of hcp-4 during mitotic prophase, this step is essential for centrosome assembly and resolution. Belongs to the WD repeat SEC13 family. | 0.613 |
| T04D3.1 | npp-23 | T04D3.1.1 | C09G9.2a.1 | Uncharacterized protein. | Nuclear Pore complex Protein. | 0.589 |
| T04D3.1 | npp-3 | T04D3.1.1 | K12D12.2.1 | Uncharacterized protein. | Nuclear Pore complex Protein. | 0.638 |
| T04D3.1 | npp-5 | T04D3.1.1 | F07A11.3.1 | Uncharacterized protein. | Nuclear pore complex protein 5; Involved in kinetochore assembly and chromosome segregation during embryonic mitosis. Required for the localization of the NDC80 complex member him-10, the chromosomal passenger complex component air- 2 and nuclear pore complex proteins npp-23 and npp-15 to kinetochores during metaphase. Required for npp-23 localization to the nuclear envelope during interphase. Recruits mdf-1, a component of the spindle assembly checkpoint, to the nuclear envelope. Appears dispensable for the assembly of the nuclear pore complex and for nuclear protein import. | 0.646 |
| T04D3.1 | npp-6 | T04D3.1.1 | F56A3.3a.3 | Uncharacterized protein. | Nuclear Pore complex Protein. | 0.590 |
| T04D3.1 | npp-8 | T04D3.1.1 | Y41D4B.19b.1 | Uncharacterized protein. | Nuclear Pore complex Protein. | 0.659 |
| T04D3.1 | spd-2 | T04D3.1.1 | F32H2.3.1 | Uncharacterized protein. | Spindle-defective protein 2; Required both for centrosome duplication and maturation. Required for pericentriolar material (PCM) recruitment. | 0.584 |
| W02B12.13 | mel-28 | W02B12.13a.1 | C38D4.3.1 | Uncharacterized protein. | Protein mel-28; Nuclear envelope protein which has essential roles in assembly of nuclear pore complexes and in chromatin maintenance during the cell cycle. Appears to be a stable structural component of the nuclear envelope during interphase. In dividing cells, localizes to kinetochores during early stages of mitosis and then to chromatin during late mitosis. Important for several mitotic processes including chromosome condensation, kinetochore assembly, chromosome segregation and cell-cycle timing. In postmitotic cells, plays a role in the early steps of nuclear pore complex assembly [...] | 0.569 |
| W02B12.13 | npp-13 | W02B12.13a.1 | Y37E3.15a.1 | Uncharacterized protein. | Nuclear pore protein. | 0.654 |
| W02B12.13 | npp-15 | W02B12.13a.1 | C29E4.4.1 | Uncharacterized protein. | Nuclear pore complex protein 15; Important for early nematode development. Belongs to the nucleoporin Nup133 family. | 0.605 |
| W02B12.13 | npp-18 | W02B12.13a.1 | Y43F4B.4.1 | Uncharacterized protein. | Nucleoporin SEH1; Probable component of the nuclear pore complex (NPC) which is involved in the trafficking of macromolecules between the cytoplasm and nucleus. | 0.549 |
| W02B12.13 | npp-2 | W02B12.13a.1 | T01G9.4.2 | Uncharacterized protein. | Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). | 0.600 |
page 1 of 23