11 items (Caenorhabditis elegans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Y37H9A.3	Coiled-coil and C2 domain-containing protein 1-like; Belongs to the CC2D1 family. (792 aa)
	vps-20	Related to yeast Vacuolar Protein Sorting factor. (208 aa)
	vps-2	Related to yeast Vacuolar Protein Sorting factor. (237 aa)
	vps-24	Related to yeast Vacuolar Protein Sorting factor. (208 aa)
	T24B8.2	Charged Multivesicular Body Protein homolog. (411 aa)
	R12C12.5	Uncharacterized protein. (236 aa)
	istr-1	Increased Sodium Tolerance Related. (445 aa)
	figl-1	Fidgetin-like protein 1; Has a role in spindle assembly which acts in the progression through mitosis during embryogenesis. Required for fertility. (594 aa)
	vps-32.1	Related to yeast Vacuolar Protein Sorting factor. (221 aa)
	spas-1	Probable spastin homolog spas-1; Severs microtubules, probably in an ATP-dependent fashion. Belongs to the AAA ATPase family. Spastin subfamily. (512 aa)
	C01A2.4	Uncharacterized protein. (207 aa)

Your Current Organism:

Caenorhabditis elegans

NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C01A2.4	R12C12.5	C01A2.4.1	R12C12.5.1	Uncharacterized protein.	Uncharacterized protein.	0.808
C01A2.4	T24B8.2	C01A2.4.1	T24B8.2.1	Uncharacterized protein.	Charged Multivesicular Body Protein homolog.	0.717
C01A2.4	Y37H9A.3	C01A2.4.1	Y37H9A.3.1	Uncharacterized protein.	Coiled-coil and C2 domain-containing protein 1-like; Belongs to the CC2D1 family.	0.513
C01A2.4	istr-1	C01A2.4.1	K10C8.3a.2	Uncharacterized protein.	Increased Sodium Tolerance Related.	0.796
C01A2.4	spas-1	C01A2.4.1	C24B5.2c.1	Uncharacterized protein.	Probable spastin homolog spas-1; Severs microtubules, probably in an ATP-dependent fashion. Belongs to the AAA ATPase family. Spastin subfamily.	0.556
C01A2.4	vps-2	C01A2.4.1	Y46G5A.12.1	Uncharacterized protein.	Related to yeast Vacuolar Protein Sorting factor.	0.968
C01A2.4	vps-20	C01A2.4.1	Y65B4A.3.1	Uncharacterized protein.	Related to yeast Vacuolar Protein Sorting factor.	0.745
C01A2.4	vps-24	C01A2.4.1	T27F7.1.2	Uncharacterized protein.	Related to yeast Vacuolar Protein Sorting factor.	0.865
C01A2.4	vps-32.1	C01A2.4.1	C56C10.3.2	Uncharacterized protein.	Related to yeast Vacuolar Protein Sorting factor.	0.858
R12C12.5	C01A2.4	R12C12.5.1	C01A2.4.1	Uncharacterized protein.	Uncharacterized protein.	0.808
R12C12.5	T24B8.2	R12C12.5.1	T24B8.2.1	Uncharacterized protein.	Charged Multivesicular Body Protein homolog.	0.961
R12C12.5	Y37H9A.3	R12C12.5.1	Y37H9A.3.1	Uncharacterized protein.	Coiled-coil and C2 domain-containing protein 1-like; Belongs to the CC2D1 family.	0.805
R12C12.5	istr-1	R12C12.5.1	K10C8.3a.2	Uncharacterized protein.	Increased Sodium Tolerance Related.	0.845
R12C12.5	spas-1	R12C12.5.1	C24B5.2c.1	Uncharacterized protein.	Probable spastin homolog spas-1; Severs microtubules, probably in an ATP-dependent fashion. Belongs to the AAA ATPase family. Spastin subfamily.	0.522
R12C12.5	vps-2	R12C12.5.1	Y46G5A.12.1	Uncharacterized protein.	Related to yeast Vacuolar Protein Sorting factor.	0.963
R12C12.5	vps-20	R12C12.5.1	Y65B4A.3.1	Uncharacterized protein.	Related to yeast Vacuolar Protein Sorting factor.	0.961
R12C12.5	vps-24	R12C12.5.1	T27F7.1.2	Uncharacterized protein.	Related to yeast Vacuolar Protein Sorting factor.	0.968
R12C12.5	vps-32.1	R12C12.5.1	C56C10.3.2	Uncharacterized protein.	Related to yeast Vacuolar Protein Sorting factor.	0.909
T24B8.2	C01A2.4	T24B8.2.1	C01A2.4.1	Charged Multivesicular Body Protein homolog.	Uncharacterized protein.	0.717
T24B8.2	R12C12.5	T24B8.2.1	R12C12.5.1	Charged Multivesicular Body Protein homolog.	Uncharacterized protein.	0.961