Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| glp-4 | iars-1 | Y87G2A.5.2 | R11A8.6.2 | Valine--tRNA ligase. | Isoleucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.899 |
| glp-4 | iars-2 | Y87G2A.5.2 | C25A1.7.1 | Valine--tRNA ligase. | Isoleucyl Amino-acyl tRNA Synthetase. | 0.759 |
| glp-4 | lars-1 | Y87G2A.5.2 | R74.1.1 | Valine--tRNA ligase. | Leucine--tRNA ligase; Involved in protein synthesis. Catalyzes the specific attachment of an amino acid to its cognate tRNA in a 2 step reaction: the amino acid (AA) is first activated by ATP to form AA-AMP and then transferred to the acceptor end of the tRNA. | 0.960 |
| glp-4 | lars-2 | Y87G2A.5.2 | ZK524.3a.1 | Valine--tRNA ligase. | Anticodon_1 domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.820 |
| glp-4 | mars-1 | Y87G2A.5.2 | F58B3.5a.1 | Valine--tRNA ligase. | Methionine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.957 |
| glp-4 | vars-1 | Y87G2A.5.2 | ZC513.4.1 | Valine--tRNA ligase. | Valyl Amino-acyl tRNA Synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.924 |
| iars-1 | glp-4 | R11A8.6.2 | Y87G2A.5.2 | Isoleucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family. | Valine--tRNA ligase. | 0.899 |
| iars-1 | iars-2 | R11A8.6.2 | C25A1.7.1 | Isoleucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family. | Isoleucyl Amino-acyl tRNA Synthetase. | 0.917 |
| iars-1 | lars-1 | R11A8.6.2 | R74.1.1 | Isoleucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family. | Leucine--tRNA ligase; Involved in protein synthesis. Catalyzes the specific attachment of an amino acid to its cognate tRNA in a 2 step reaction: the amino acid (AA) is first activated by ATP to form AA-AMP and then transferred to the acceptor end of the tRNA. | 0.999 |
| iars-1 | lars-2 | R11A8.6.2 | ZK524.3a.1 | Isoleucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family. | Anticodon_1 domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.893 |
| iars-1 | mars-1 | R11A8.6.2 | F58B3.5a.1 | Isoleucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family. | Methionine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.999 |
| iars-1 | vars-1 | R11A8.6.2 | ZC513.4.1 | Isoleucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family. | Valyl Amino-acyl tRNA Synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.753 |
| iars-2 | glp-4 | C25A1.7.1 | Y87G2A.5.2 | Isoleucyl Amino-acyl tRNA Synthetase. | Valine--tRNA ligase. | 0.759 |
| iars-2 | iars-1 | C25A1.7.1 | R11A8.6.2 | Isoleucyl Amino-acyl tRNA Synthetase. | Isoleucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.917 |
| iars-2 | lars-1 | C25A1.7.1 | R74.1.1 | Isoleucyl Amino-acyl tRNA Synthetase. | Leucine--tRNA ligase; Involved in protein synthesis. Catalyzes the specific attachment of an amino acid to its cognate tRNA in a 2 step reaction: the amino acid (AA) is first activated by ATP to form AA-AMP and then transferred to the acceptor end of the tRNA. | 0.957 |
| iars-2 | lars-2 | C25A1.7.1 | ZK524.3a.1 | Isoleucyl Amino-acyl tRNA Synthetase. | Anticodon_1 domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.871 |
| iars-2 | mars-1 | C25A1.7.1 | F58B3.5a.1 | Isoleucyl Amino-acyl tRNA Synthetase. | Methionine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.946 |
| iars-2 | vars-1 | C25A1.7.1 | ZC513.4.1 | Isoleucyl Amino-acyl tRNA Synthetase. | Valyl Amino-acyl tRNA Synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.685 |
| lars-1 | glp-4 | R74.1.1 | Y87G2A.5.2 | Leucine--tRNA ligase; Involved in protein synthesis. Catalyzes the specific attachment of an amino acid to its cognate tRNA in a 2 step reaction: the amino acid (AA) is first activated by ATP to form AA-AMP and then transferred to the acceptor end of the tRNA. | Valine--tRNA ligase. | 0.960 |
| lars-1 | iars-1 | R74.1.1 | R11A8.6.2 | Leucine--tRNA ligase; Involved in protein synthesis. Catalyzes the specific attachment of an amino acid to its cognate tRNA in a 2 step reaction: the amino acid (AA) is first activated by ATP to form AA-AMP and then transferred to the acceptor end of the tRNA. | Isoleucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.999 |
page 1 of 3