Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ace-1 | ace-2 | W09B12.1.2 | Y44E3A.2.1 | Acetylcholinesterase 1; Rapidly hydrolyzes choline released into the synapse. It can hydrolyze butyrylthiocholine. | Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. | 0.928 |
| ace-1 | ace-4 | W09B12.1.2 | Y48B6A.7.1 | Acetylcholinesterase 1; Rapidly hydrolyzes choline released into the synapse. It can hydrolyze butyrylthiocholine. | Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. | 0.916 |
| ace-1 | act-5 | W09B12.1.2 | T25C8.2.2 | Acetylcholinesterase 1; Rapidly hydrolyzes choline released into the synapse. It can hydrolyze butyrylthiocholine. | ACTin. | 0.414 |
| ace-2 | ace-1 | Y44E3A.2.1 | W09B12.1.2 | Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. | Acetylcholinesterase 1; Rapidly hydrolyzes choline released into the synapse. It can hydrolyze butyrylthiocholine. | 0.928 |
| ace-2 | ace-4 | Y44E3A.2.1 | Y48B6A.7.1 | Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. | Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. | 0.916 |
| ace-2 | act-5 | Y44E3A.2.1 | T25C8.2.2 | Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. | ACTin. | 0.422 |
| ace-4 | ace-1 | Y48B6A.7.1 | W09B12.1.2 | Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. | Acetylcholinesterase 1; Rapidly hydrolyzes choline released into the synapse. It can hydrolyze butyrylthiocholine. | 0.916 |
| ace-4 | ace-2 | Y48B6A.7.1 | Y44E3A.2.1 | Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. | Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. | 0.916 |
| act-5 | ace-1 | T25C8.2.2 | W09B12.1.2 | ACTin. | Acetylcholinesterase 1; Rapidly hydrolyzes choline released into the synapse. It can hydrolyze butyrylthiocholine. | 0.414 |
| act-5 | ace-2 | T25C8.2.2 | Y44E3A.2.1 | ACTin. | Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. | 0.422 |
| act-5 | daf-16 | T25C8.2.2 | R13H8.1h.1 | ACTin. | Forkhead box protein O; Forkhead-type transcription factor. Binds to the promoters of genes that contain the daf-16 binding element (DBE), TTGTTTAC, in their regulatory region. Functions in the Insulin/IGF-1-like signaling (IIS) mediated pathway which affects lipogenesis, lifespan, starvation survival, heat shock and oxidative stress responses, and dauer formation. Longevity signaling predominantly arises from expression in the intestine. Daf-16 transcriptional activity is negatively regulated by cytoplasmic sequestration by association with ftt-2. Inhibition is required for the carbon [...] | 0.823 |
| act-5 | daf-2 | T25C8.2.2 | Y55D5A.5c.2 | ACTin. | Insulin-like receptor subunit alpha; Insulin receptor-like tyrosine kinase which regulates metabolism, controls longevity and prevents developmental arrest at the dauer stage. Binding of INS family members may either stimulate, or antagonize, association of the receptor with downstream mediators such as pdk-1 and age-1. Required for germline progenitor proliferation during larval development. Required for the response to environmental stimuli such as food, pheromone, and temperature. Negatively regulates resistance to UV and oxidative stress. Role in immune function and pathogen resist [...] | 0.476 |
| act-5 | hsf-1 | T25C8.2.2 | Y53C10A.12.1 | ACTin. | HSF_DOMAIN domain-containing protein. | 0.402 |
| act-5 | hsp-4 | T25C8.2.2 | F43E2.8a.2 | ACTin. | Endoplasmic reticulum chaperone BiP homolog; Endoplasmic reticulum chaperone that plays a key role in protein folding and quality control in the endoplasmic reticulum lumen (By similarity). Required for ER dynamics during the first embryonic cell divisions. Specifically, controls ER transition into sheet-like structures at the onset of mitosis, possibly by regulating homotypic membrane fusion. Belongs to the heat shock protein 70 family. | 0.401 |
| act-5 | myo-3 | T25C8.2.2 | K12F2.1.1 | ACTin. | Myosin-3; Essential for muscle contraction. Involved in ovulation likely by regulating the contraction of gonadal myoepithelial sheath cells. Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.843 |
| act-5 | pat-2 | T25C8.2.2 | F54F2.1.1 | ACTin. | Integrin alpha pat-2; Required for muscle development probably through the regulation of the actin-myosin cytoskeleton. Component of an integrin containing attachment complex, which is required for muscle maintenance. During the formation of neuromuscular junctions at the larval stage, negatively regulates membrane protrusion from body wall muscles, probably through lamins such as epi-1, lam-2 and unc-52. Required for distal tip cell migration and dorsal pathfinding. Required for egg-laying. May play a role in cell motility and cell-cell interactions (By similarity). Plays a role in vu [...] | 0.458 |
| act-5 | pat-3 | T25C8.2.2 | ZK1058.2.1 | ACTin. | Integrin beta pat-3; Integrin alpha ina-1/beta pat-3 is a receptor for laminin. Integrin alpha pat-2/beta pat-3 recognizes the sequence R-G-D in its ligands (Probable). Plays a role in cell migration, morphogenesis and probably in cell-cell interactions. During gonad morphogenesis, involved in distal tip cell (DTC)-mediated guidance of gonad elongation, in maintaining their sharp tapering morphology and in their migration. Component of an integrin containing attachment complex, which is required for muscle development and maintenance. Involved in the assembly of dense bodies and M line [...] | 0.861 |
| act-5 | rol-6 | T25C8.2.2 | T01B7.7.2 | ACTin. | Cuticle collagen rol-6; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. Involved in body morphogenesis. | 0.724 |
| act-5 | rrf-3 | T25C8.2.2 | F10B5.7.1 | ACTin. | RNA-dependent RNA polymerase Family. | 0.419 |
| act-5 | sir-2.1 | T25C8.2.2 | R11A8.4a.1 | ACTin. | NAD-dependent protein deacetylase sir-2.1; NAD-dependent deacetylase (By similarity). Required for a reduction of the 'Lys-16' acetylation of histone H4 (H4K16ac) on dosage-compensated X chromosomes in hermaphrodites. Plays a role in germ cell and somatic cell apoptosis in response to DNA damage. Functions upstream of daf-16 in the insulin-like signaling pathway, promoting daf-16 mediated transcriptional activation and increased lifespan. May also regulate lifespan independently of daf-16 by modulating the transcription of genes involved in the stress response of the endoplasmic reticu [...] | 0.431 |
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