Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| chd-1 | chd-3 | H06O01.2.1 | T14G8.1.1 | Chromodomain and Helicase Domain protein. | Chromodomain-helicase-DNA-binding protein 3 homolog; Chromatin-remodeling protein that has a role in notch signaling-dependent vulval cell fate determination. May also have a role in pharyngeal precursor cell specification. | 0.525 |
| chd-1 | ddb-1 | H06O01.2.1 | M18.5.1 | Chromodomain and Helicase Domain protein. | DNA damage-binding protein 1; Plays a role in DNA repair. May be a component of an E3 ubiquitin-protein ligase which promotes histone ubiquitination in response to UV irradiation. Histone ubiquitination may be important for subsequent DNA repair (By similarity). Promotes the degradation of the replication licensing factor cdt-1 during S-phase, thereby preventing rereplication of DNA during a single round of cell division. | 0.408 |
| chd-1 | hsr-9 | H06O01.2.1 | T05F1.6.1 | Chromodomain and Helicase Domain protein. | Protein hsr-9; May have a role in DNA double-strand break repair following gamma-irradiation. | 0.581 |
| chd-1 | pbrm-1 | H06O01.2.1 | C26C6.1a.1 | Chromodomain and Helicase Domain protein. | HMG box domain-containing protein. | 0.603 |
| chd-1 | pcn-1 | H06O01.2.1 | W03D2.4.1 | Chromodomain and Helicase Domain protein. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.423 |
| chd-3 | chd-1 | T14G8.1.1 | H06O01.2.1 | Chromodomain-helicase-DNA-binding protein 3 homolog; Chromatin-remodeling protein that has a role in notch signaling-dependent vulval cell fate determination. May also have a role in pharyngeal precursor cell specification. | Chromodomain and Helicase Domain protein. | 0.525 |
| chd-3 | pbrm-1 | T14G8.1.1 | C26C6.1a.1 | Chromodomain-helicase-DNA-binding protein 3 homolog; Chromatin-remodeling protein that has a role in notch signaling-dependent vulval cell fate determination. May also have a role in pharyngeal precursor cell specification. | HMG box domain-containing protein. | 0.484 |
| chd-3 | pcn-1 | T14G8.1.1 | W03D2.4.1 | Chromodomain-helicase-DNA-binding protein 3 homolog; Chromatin-remodeling protein that has a role in notch signaling-dependent vulval cell fate determination. May also have a role in pharyngeal precursor cell specification. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.424 |
| ddb-1 | chd-1 | M18.5.1 | H06O01.2.1 | DNA damage-binding protein 1; Plays a role in DNA repair. May be a component of an E3 ubiquitin-protein ligase which promotes histone ubiquitination in response to UV irradiation. Histone ubiquitination may be important for subsequent DNA repair (By similarity). Promotes the degradation of the replication licensing factor cdt-1 during S-phase, thereby preventing rereplication of DNA during a single round of cell division. | Chromodomain and Helicase Domain protein. | 0.408 |
| ddb-1 | ercc-1 | M18.5.1 | F10G8.7.2 | DNA damage-binding protein 1; Plays a role in DNA repair. May be a component of an E3 ubiquitin-protein ligase which promotes histone ubiquitination in response to UV irradiation. Histone ubiquitination may be important for subsequent DNA repair (By similarity). Promotes the degradation of the replication licensing factor cdt-1 during S-phase, thereby preventing rereplication of DNA during a single round of cell division. | ERCC (DNA excision repair protein) homolog. | 0.819 |
| ddb-1 | hsr-9 | M18.5.1 | T05F1.6.1 | DNA damage-binding protein 1; Plays a role in DNA repair. May be a component of an E3 ubiquitin-protein ligase which promotes histone ubiquitination in response to UV irradiation. Histone ubiquitination may be important for subsequent DNA repair (By similarity). Promotes the degradation of the replication licensing factor cdt-1 during S-phase, thereby preventing rereplication of DNA during a single round of cell division. | Protein hsr-9; May have a role in DNA double-strand break repair following gamma-irradiation. | 0.562 |
| ddb-1 | pcn-1 | M18.5.1 | W03D2.4.1 | DNA damage-binding protein 1; Plays a role in DNA repair. May be a component of an E3 ubiquitin-protein ligase which promotes histone ubiquitination in response to UV irradiation. Histone ubiquitination may be important for subsequent DNA repair (By similarity). Promotes the degradation of the replication licensing factor cdt-1 during S-phase, thereby preventing rereplication of DNA during a single round of cell division. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.612 |
| ddb-1 | rad-23 | M18.5.1 | ZK20.3.2 | DNA damage-binding protein 1; Plays a role in DNA repair. May be a component of an E3 ubiquitin-protein ligase which promotes histone ubiquitination in response to UV irradiation. Histone ubiquitination may be important for subsequent DNA repair (By similarity). Promotes the degradation of the replication licensing factor cdt-1 during S-phase, thereby preventing rereplication of DNA during a single round of cell division. | Uncharacterized protein. | 0.926 |
| ercc-1 | ddb-1 | F10G8.7.2 | M18.5.1 | ERCC (DNA excision repair protein) homolog. | DNA damage-binding protein 1; Plays a role in DNA repair. May be a component of an E3 ubiquitin-protein ligase which promotes histone ubiquitination in response to UV irradiation. Histone ubiquitination may be important for subsequent DNA repair (By similarity). Promotes the degradation of the replication licensing factor cdt-1 during S-phase, thereby preventing rereplication of DNA during a single round of cell division. | 0.819 |
| ercc-1 | hsr-9 | F10G8.7.2 | T05F1.6.1 | ERCC (DNA excision repair protein) homolog. | Protein hsr-9; May have a role in DNA double-strand break repair following gamma-irradiation. | 0.785 |
| ercc-1 | hus-1 | F10G8.7.2 | H26D21.1.1 | ERCC (DNA excision repair protein) homolog. | Checkpoint protein. | 0.673 |
| ercc-1 | lig-4 | F10G8.7.2 | C07H6.1.1 | ERCC (DNA excision repair protein) homolog. | LIGase. | 0.943 |
| ercc-1 | rad-23 | F10G8.7.2 | ZK20.3.2 | ERCC (DNA excision repair protein) homolog. | Uncharacterized protein. | 0.910 |
| ercc-1 | rad-50 | F10G8.7.2 | T04H1.4b.2 | ERCC (DNA excision repair protein) homolog. | DNA repair protein rad-50; Essential component of the MRN complex, a complex that possesses single-stranded DNA endonuclease and 3' to 5' exonuclease activities, and plays a central role in double-strand break (DSB) repair, chromosome morphogenesis, DNA repair and meiosis. In the complex, it mediates the ATP-binding and is probably required to bind DNA ends and hold them in close proximity. | 0.591 |
| ercc-1 | rad-54 | F10G8.7.2 | W06D4.6.1 | ERCC (DNA excision repair protein) homolog. | Uncharacterized protein. | 0.858 |
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