Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| act-5 | amph-1 | T25C8.2.2 | F58G6.1.1 | ACTin. | AMPHiphysin homolog. | 0.875 |
| act-5 | arf-1.2 | T25C8.2.2 | B0336.2.3 | ACTin. | ADP-ribosylation factor 1-like 2; GTP-binding protein involved in protein trafficking; may modulate vesicle budding and uncoating within the Golgi apparatus. Involved in endoplasmic reticulum dynamics during embryogenesis. Also required for adult germline function. Plays a role in cell shedding during embryogenesis probably by promoting the endocytosis of cell adhesion molecules. During neurogenesis, involved in cell autonomous Q.p neuroblast asymmetric divisions that generate one precursor cell and one apoptotic cell, probably by controlling endocytosis. | 0.772 |
| act-5 | arf-6 | T25C8.2.2 | Y116A8C.12.1 | ACTin. | ADP-Ribosylation Factor related; Belongs to the small GTPase superfamily. Arf family. | 0.861 |
| act-5 | chc-1 | T25C8.2.2 | T20G5.1.1 | ACTin. | Probable clathrin heavy chain 1; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (By similarity). May play a role in yolk protein clatherin-mediated endocytosis by oocytes during oogenesis ; Belongs to the clathrin heavy chain family. | 0.847 |
| act-5 | dyn-1 | T25C8.2.2 | C02C6.1b.1 | ACTin. | Dynamin; Microtubule-associated force-producing protein involved in producing microtubule bundles and able to bind and hydrolyze GTP. Most probably involved in vesicular trafficking processes, in particular endocytosis (By similarity). Required for coelomocyte endocytosis. Involved in apoptotic cell phagocytosis. Required for recruitment of phosphatidylinositol 3- kinase piki-1 to phagosomes. May play a role in rab-5 recruitment to cell-corpses-containing phagosomes but not to endosomes. Required for embryonic and larval development. Belongs to the TRAFAC class dynamin-like GTPase supe [...] | 0.966 |
| act-5 | eea-1 | T25C8.2.2 | T10G3.5a.1 | ACTin. | FYVE-type domain-containing protein. | 0.743 |
| act-5 | epn-1 | T25C8.2.2 | T04C10.2b.1 | ACTin. | ENTH domain-containing protein. | 0.486 |
| act-5 | fcho-1 | T25C8.2.2 | F56D12.6a.1 | ACTin. | FCH domain Only (FCH stands for Fes/CIP4 homology domain). | 0.423 |
| act-5 | itsn-1 | T25C8.2.2 | Y116A8C.36d.1 | ACTin. | ITSN (Intersectin) family. | 0.612 |
| act-5 | rab-5 | T25C8.2.2 | F26H9.6.1 | ACTin. | RAB family. | 0.904 |
| act-5 | rab-8 | T25C8.2.2 | D1037.4.2 | ACTin. | RAB family. | 0.795 |
| act-5 | vps-34 | T25C8.2.2 | B0025.1a.1 | ACTin. | Phosphatidylinositol 3-kinase catalytic subunit type 3; Catalytic subunit of the PI3K complex that mediates formation of phosphatidylinositol 3-phosphate. Together with bec-1, mediates the production of phosphatidylinositol 3-phosphate on intracellular vesicles and thereby regulates membrane trafficking. Plays a role in endosome-to-Golgi retrograde transport of mig-14. Involved in clearance of apoptotic cell corpses by phagosomes. Phagosome maturation requires two sequential and non-overlapping pulses of phosphatidylinositol-3-phosphate (PI3P) on the vesicle surface which mediates recr [...] | 0.697 |
| amph-1 | act-5 | F58G6.1.1 | T25C8.2.2 | AMPHiphysin homolog. | ACTin. | 0.875 |
| amph-1 | arf-1.2 | F58G6.1.1 | B0336.2.3 | AMPHiphysin homolog. | ADP-ribosylation factor 1-like 2; GTP-binding protein involved in protein trafficking; may modulate vesicle budding and uncoating within the Golgi apparatus. Involved in endoplasmic reticulum dynamics during embryogenesis. Also required for adult germline function. Plays a role in cell shedding during embryogenesis probably by promoting the endocytosis of cell adhesion molecules. During neurogenesis, involved in cell autonomous Q.p neuroblast asymmetric divisions that generate one precursor cell and one apoptotic cell, probably by controlling endocytosis. | 0.458 |
| amph-1 | arf-6 | F58G6.1.1 | Y116A8C.12.1 | AMPHiphysin homolog. | ADP-Ribosylation Factor related; Belongs to the small GTPase superfamily. Arf family. | 0.755 |
| amph-1 | chc-1 | F58G6.1.1 | T20G5.1.1 | AMPHiphysin homolog. | Probable clathrin heavy chain 1; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (By similarity). May play a role in yolk protein clatherin-mediated endocytosis by oocytes during oogenesis ; Belongs to the clathrin heavy chain family. | 0.987 |
| amph-1 | dnj-25 | F58G6.1.1 | W07A8.3a.2 | AMPHiphysin homolog. | J domain-containing protein. | 0.830 |
| amph-1 | dyn-1 | F58G6.1.1 | C02C6.1b.1 | AMPHiphysin homolog. | Dynamin; Microtubule-associated force-producing protein involved in producing microtubule bundles and able to bind and hydrolyze GTP. Most probably involved in vesicular trafficking processes, in particular endocytosis (By similarity). Required for coelomocyte endocytosis. Involved in apoptotic cell phagocytosis. Required for recruitment of phosphatidylinositol 3- kinase piki-1 to phagosomes. May play a role in rab-5 recruitment to cell-corpses-containing phagosomes but not to endosomes. Required for embryonic and larval development. Belongs to the TRAFAC class dynamin-like GTPase supe [...] | 0.993 |
| amph-1 | eea-1 | F58G6.1.1 | T10G3.5a.1 | AMPHiphysin homolog. | FYVE-type domain-containing protein. | 0.722 |
| amph-1 | epn-1 | F58G6.1.1 | T04C10.2b.1 | AMPHiphysin homolog. | ENTH domain-containing protein. | 0.822 |
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