STRINGSTRING
sav-1 sav-1 vps-26 vps-26 snf-1 snf-1 mig-1 mig-1 tsg-101 tsg-101 hgrs-1 hgrs-1 aly-2 aly-2 rab-5 rab-5 usp-33 usp-33
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sav-1SAlVador (Cell proliferation regulator) homolog. (389 aa)
vps-26Vacuolar protein sorting-associated protein 26; May play a role in vesicular protein sorting, similar to the yeast retromer proteins. (410 aa)
snf-1Sodium: Neurotransmitter symporter Family. (617 aa)
mig-1Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (529 aa)
tsg-101Tumor Susceptibility Gene homolog. (425 aa)
hgrs-1Hepatocyte Growth factor-Regulated TK Substrate (HRS) family. (729 aa)
aly-2FoP_duplication domain-containing protein. (227 aa)
rab-5RAB family. (208 aa)
usp-33Ubiquitin carboxyl-terminal hydrolase. (716 aa)
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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