Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| B0511.6 | Y23H5B.6 | B0511.6.1 | Y23H5B.6a.1 | RNA helicase. | RNA helicase. | 0.990 |
| B0511.6 | drh-1 | B0511.6.1 | F15B10.2a.1 | RNA helicase. | Dicer-related helicase. | 0.662 |
| B0511.6 | drh-3 | B0511.6.1 | D2005.5.1 | RNA helicase. | Dicer Related Helicase. | 0.704 |
| B0511.6 | mut-14 | B0511.6.1 | C14C11.6.1 | RNA helicase. | MUTator; Belongs to the DEAD box helicase family. | 0.577 |
| B0511.6 | rde-1 | B0511.6.1 | K08H10.7.1 | RNA helicase. | RNA interference promoting factor RDE-1. | 0.432 |
| B0511.6 | rde-4 | B0511.6.1 | T20G5.11.1 | RNA helicase. | RNA interference promoting factor. | 0.475 |
| Y23H5B.6 | B0511.6 | Y23H5B.6a.1 | B0511.6.1 | RNA helicase. | RNA helicase. | 0.990 |
| Y23H5B.6 | drh-1 | Y23H5B.6a.1 | F15B10.2a.1 | RNA helicase. | Dicer-related helicase. | 0.660 |
| Y23H5B.6 | drh-3 | Y23H5B.6a.1 | D2005.5.1 | RNA helicase. | Dicer Related Helicase. | 0.702 |
| Y23H5B.6 | mut-14 | Y23H5B.6a.1 | C14C11.6.1 | RNA helicase. | MUTator; Belongs to the DEAD box helicase family. | 0.494 |
| Y23H5B.6 | rde-1 | Y23H5B.6a.1 | K08H10.7.1 | RNA helicase. | RNA interference promoting factor RDE-1. | 0.454 |
| Y23H5B.6 | rde-4 | Y23H5B.6a.1 | T20G5.11.1 | RNA helicase. | RNA interference promoting factor. | 0.544 |
| atf-7 | daf-16 | C07G2.2c.2 | R13H8.1h.1 | BZIP domain-containing protein. | Forkhead box protein O; Forkhead-type transcription factor. Binds to the promoters of genes that contain the daf-16 binding element (DBE), TTGTTTAC, in their regulatory region. Functions in the Insulin/IGF-1-like signaling (IIS) mediated pathway which affects lipogenesis, lifespan, starvation survival, heat shock and oxidative stress responses, and dauer formation. Longevity signaling predominantly arises from expression in the intestine. Daf-16 transcriptional activity is negatively regulated by cytoplasmic sequestration by association with ftt-2. Inhibition is required for the carbon [...] | 0.646 |
| atf-7 | daf-2 | C07G2.2c.2 | Y55D5A.5c.2 | BZIP domain-containing protein. | Insulin-like receptor subunit alpha; Insulin receptor-like tyrosine kinase which regulates metabolism, controls longevity and prevents developmental arrest at the dauer stage. Binding of INS family members may either stimulate, or antagonize, association of the receptor with downstream mediators such as pdk-1 and age-1. Required for germline progenitor proliferation during larval development. Required for the response to environmental stimuli such as food, pheromone, and temperature. Negatively regulates resistance to UV and oxidative stress. Role in immune function and pathogen resist [...] | 0.452 |
| atf-7 | hsf-1 | C07G2.2c.2 | Y53C10A.12.1 | BZIP domain-containing protein. | HSF_DOMAIN domain-containing protein. | 0.580 |
| atf-7 | mpk-1 | C07G2.2c.2 | F43C1.2b.1 | BZIP domain-containing protein. | Mitogen-activated protein kinase mpk-1; Function in let-60 Ras signaling pathway; acts downstream of lin-45 raf kinase, but before the lin-1 gene product in controlling vulval cell differentiation. Plays a negative role in proximal germline proliferation in the mitotic zone. Required for progression of developing oocytes through the pachytene stage. In oocytes, inhibits the activity of the chloride channel clh-3, likely by activating gck-3. Plays a role in response to M.nematophilum-mediated bacterial infection by promoting tail swelling and preventing constipation. Involved in fluid h [...] | 0.755 |
| atf-7 | nsy-1 | C07G2.2c.2 | F59A6.1a.1 | BZIP domain-containing protein. | Mitogen-activated protein kinase kinase kinase nsy-1; Serine/threonine-protein kinase which, by phosphorylating and activating sek-1, plays an important role in the activation of the p38 pathway also composed of the downstream effectors sek-1 and pmk-1. Downstream of CaMKII unc-43 and adapter protein tir-1, plays a role in determining asymmetric cell fates in olfactory AWC neurons during neuronal development. Activation results in the repression of odorant receptor str-2 expression in one of the 2 AWC neurons. Involved in resistance to pathogenic Gram-positive and Gram-negative bacteri [...] | 0.832 |
| atf-7 | pmk-1 | C07G2.2c.2 | B0218.3.1 | BZIP domain-containing protein. | Mitogen-activated protein kinase pmk-1; Serine/threonine kinase which responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating downstream targets. Phosphorylates snk-1 which probably regulates skn-1 nuclear translocation in response to oxidative stress. Probably by activating skn-1, involved in the up- regulation of gcs-1 and glutathione-S-transferase gst-4 expression upon bacteria infection. Up-regulates expression of gcs-1 in intestinal cells upon arsenite treatment. Functions downstream of the MAPKK sek-1 and the MAPKKK nsy-1 as the MAP kinase [...] | 0.975 |
| atf-7 | skn-1 | C07G2.2c.2 | T19E7.2a.1 | BZIP domain-containing protein. | Protein skinhead-1; Transcription factor required to specify the fate of ventral blastomeres in the early embryo, and postembryonically for the development of the intestine. Directly regulates expression of zygotically expressed med-1 and med-2 to direct mesendoderm development. Required for stl-1 mRNA up- regulation in response to oxidative stress and anoxia. Required for the up-regulation of gcs-1 and several glutathione-S-transferase mRNAs in response to oxidative stress generated during pathogenic bacterial infection. In neurons, involved in mitochondrial fusion and behavioral reco [...] | 0.830 |
| atf-7 | tir-1 | C07G2.2c.2 | F13B10.1f.1 | BZIP domain-containing protein. | NAD(+) hydrolase tir-1; NAD(+) hydrolase, which plays a key role in non-apoptotic cell death by regulating NAD(+) metabolism. In response to stress, homooligomerizes and catalyzes cleavage of NAD(+) into ADP-D-ribose (ADPR) and nicotinamide; NAD(+) cleavage promoting non-apoptotic neuronal cell death. In males, involved in non-apoptotic death of the linker cell which guides gonad elongation during larval development. Required for both innate immune response and specification of AWC(OFF) neuron. During late embryogenesis, it. acts downstream of CAMKII (unc-43) to regulate specification [...] | 0.824 |
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