Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cytb-5.1 | hsp-3 | C31E10.7.2 | C15H9.6a.5 | Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family. | Heat shock 70 kDa protein C; Probably plays a role in facilitating the assembly of multimeric protein complexes inside the ER. | 0.408 |
| dma-1 | hpo-30 | T01G9.3.1 | R04F11.1.1 | LRRCT domain-containing protein. | Uncharacterized protein. | 0.976 |
| dma-1 | kpc-1 | T01G9.3.1 | F11A6.1a.1 | LRRCT domain-containing protein. | Furin-like protease kpc-1; Furin-like protease which cleaves proproteins at the RX(K/R)R consensus motif. During neuronal development, regulates the formation and extension of dendrite branches and cellular positioning of various type of neurons. Promotes the formation, extension and self-avoidance of dendritic branches of PVD and FLP mechanosensory neurons. In PVD neurons, regulates plasma membrane levels of branching receptor dma-1 by targeting it to late endosomes and thus promotes normal dendrite branching and dendrite self-avoidance. Also controls dendrite extension in AIY and D-t [...] | 0.783 |
| dma-1 | lrr-1 | T01G9.3.1 | F33G12.4.1 | LRRCT domain-containing protein. | Leucine-Rich Repeat protein. | 0.642 |
| dma-1 | mnr-1 | T01G9.3.1 | W01F3.1a.1 | LRRCT domain-containing protein. | MeNoRin (Dendritic branching protein). | 0.985 |
| dma-1 | sax-7 | T01G9.3.1 | C18F3.2c.1 | LRRCT domain-containing protein. | Fibronectin type-III domain-containing protein. | 0.975 |
| dma-1 | smp-1 | T01G9.3.1 | Y54E5B.1a.1 | LRRCT domain-containing protein. | Semaphorin-1A; May function in growth cone guidance; Belongs to the semaphorin family. | 0.412 |
| dpy-5 | unc-119 | F27C1.8.1 | M142.1c.1 | Cuticle collagen dpy-5; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Protein unc-119; Myristoyl-binding protein that acts as a cargo adapter: specifically binds the myristoyl moiety of a subset of N-terminally myristoylated proteins and is required for their localization. Plays a key role in ciliary membrane localization of proteins. Required for the establishment or function of the nervous system. | 0.767 |
| glr-1 | rab-1 | C06E1.4.1 | C39F7.4.1 | Glutamate receptor 1; Non-NMDA (N-methyl-D-aspartate) ionotropic glutamate receptor. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. The postsynaptic actions of glutamate are mediated by a variety of receptors that are named according to their selective agonists. May contribute to a sensory discrimination between mechanical and chemical stimuli. Plays a role in controlling movement in response to environmental cues such as food availability and mechanosensory stimulation such as the nose touch response. In AIB interneurons, promotes om [...] | RAB family. | 0.499 |
| glr-1 | sar-1 | C06E1.4.1 | ZK180.4.1 | Glutamate receptor 1; Non-NMDA (N-methyl-D-aspartate) ionotropic glutamate receptor. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. The postsynaptic actions of glutamate are mediated by a variety of receptors that are named according to their selective agonists. May contribute to a sensory discrimination between mechanical and chemical stimuli. Plays a role in controlling movement in response to environmental cues such as food availability and mechanosensory stimulation such as the nose touch response. In AIB interneurons, promotes om [...] | GTP-binding protein SAR1; Involved in transport from the endoplasmic reticulum to the Golgi apparatus; Belongs to the small GTPase superfamily. SAR1 family. | 0.501 |
| glr-1 | sec-23 | C06E1.4.1 | Y113G7A.3.1 | Glutamate receptor 1; Non-NMDA (N-methyl-D-aspartate) ionotropic glutamate receptor. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. The postsynaptic actions of glutamate are mediated by a variety of receptors that are named according to their selective agonists. May contribute to a sensory discrimination between mechanical and chemical stimuli. Plays a role in controlling movement in response to environmental cues such as food availability and mechanosensory stimulation such as the nose touch response. In AIB interneurons, promotes om [...] | Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. | 0.499 |
| gpd-2 | hsp-4 | K10B3.8.2 | F43E2.8a.2 | Glyceraldehyde-3-phosphate dehydrogenase 2. | Endoplasmic reticulum chaperone BiP homolog; Endoplasmic reticulum chaperone that plays a key role in protein folding and quality control in the endoplasmic reticulum lumen (By similarity). Required for ER dynamics during the first embryonic cell divisions. Specifically, controls ER transition into sheet-like structures at the onset of mitosis, possibly by regulating homotypic membrane fusion. Belongs to the heat shock protein 70 family. | 0.459 |
| gpd-2 | hsp-70 | K10B3.8.2 | C12C8.1.1 | Glyceraldehyde-3-phosphate dehydrogenase 2. | Heat Shock Protein; Belongs to the heat shock protein 70 family. | 0.785 |
| gpd-2 | hsp-90 | K10B3.8.2 | C47E8.5.3 | Glyceraldehyde-3-phosphate dehydrogenase 2. | Heat shock protein 90; Molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved for instance in cell cycle control and signal transduction. Undergoes a functional cycle that is linked to its ATPase activity. This cycle probably induces conformational changes in the client proteins, thereby causing their activation. Interacts dynamically with various co- chaperones that modulate its substrate recognition, ATPase cycle and chaperone function. By stabilizing the receptor-type guanylate cyclase daf-11 or another sig [...] | 0.808 |
| his-24 | unc-119 | M163.3.1 | M142.1c.1 | Histone 24; Histones H1 are necessary for the condensation of nucleosome chains into higher-order structures. | Protein unc-119; Myristoyl-binding protein that acts as a cargo adapter: specifically binds the myristoyl moiety of a subset of N-terminally myristoylated proteins and is required for their localization. Plays a key role in ciliary membrane localization of proteins. Required for the establishment or function of the nervous system. | 0.792 |
| hpo-30 | dma-1 | R04F11.1.1 | T01G9.3.1 | Uncharacterized protein. | LRRCT domain-containing protein. | 0.976 |
| hpo-30 | kpc-1 | R04F11.1.1 | F11A6.1a.1 | Uncharacterized protein. | Furin-like protease kpc-1; Furin-like protease which cleaves proproteins at the RX(K/R)R consensus motif. During neuronal development, regulates the formation and extension of dendrite branches and cellular positioning of various type of neurons. Promotes the formation, extension and self-avoidance of dendritic branches of PVD and FLP mechanosensory neurons. In PVD neurons, regulates plasma membrane levels of branching receptor dma-1 by targeting it to late endosomes and thus promotes normal dendrite branching and dendrite self-avoidance. Also controls dendrite extension in AIY and D-t [...] | 0.700 |
| hpo-30 | mnr-1 | R04F11.1.1 | W01F3.1a.1 | Uncharacterized protein. | MeNoRin (Dendritic branching protein). | 0.970 |
| hpo-30 | sax-7 | R04F11.1.1 | C18F3.2c.1 | Uncharacterized protein. | Fibronectin type-III domain-containing protein. | 0.964 |
| hsp-3 | cytb-5.1 | C15H9.6a.5 | C31E10.7.2 | Heat shock 70 kDa protein C; Probably plays a role in facilitating the assembly of multimeric protein complexes inside the ER. | Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family. | 0.408 |
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